FFCP PHASE1:Hg19::chr16:28223166..28223223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23214 | |EntrezGene=23214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19733 | |HGNC=19733 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QU8 | |UniProt=Q96QU8 | ||
|association_with_transcript=0bp_to_ENST00000304658,NM_015171,uc002dpa.1,uc002dpb.1,uc010vcp.1_5end | |association_with_transcript=0bp_to_ENST00000304658,NM_015171,uc002dpa.1,uc002dpb.1,uc010vcp.1_5end | ||
|cluster_id=chr16:28223166..28223223,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_XPO6_5end | |description=CAGE_peak_2_at_XPO6_5end | ||
|id=chr16:28223166..28223223,- | |id=chr16:28223166..28223223,- | ||
|ontology_enrichment_celltype=CL:0000048!7.05e-22!430;CL:0000723!1.50e-21!436;CL:0000034!2.16e-21!444;CL:0000144!9.98e-20!625;CL:0000055!8.18e-18!180;CL:0002371!9.39e-18!591;CL:0000219!5.07e-15!390;CL:0000003!6.51e-15!722;CL:0000134!4.90e-13!358;CL:0002320!1.87e-12!365;CL:0000542!9.34e-12!53;CL:0000051!9.34e-12!53;CL:0000838!2.59e-11!52;CL:0000084!8.57e-11!25;CL:0000827!8.57e-11!25;CL:0000548!8.64e-11!679;CL:0000004!8.64e-11!679;CL:0000255!8.64e-11!679;CL:0000012!1.27e-10!682;CL:0000791!2.02e-10!18;CL:0000789!2.02e-10!18;CL:0002420!2.02e-10!18;CL:0002419!2.02e-10!18;CL:0000790!2.02e-10!18;CL:0000057!4.75e-09!75;CL:0000222!1.14e-08!119;CL:0000192!7.66e-08!42;CL:0000514!7.66e-08!42;CL:0000680!8.66e-08!57;CL:0000056!8.66e-08!57;CL:0000355!8.66e-08!57;CL:0000081!1.99e-07!11;CL:0000187!2.44e-07!54;CL:0000183!2.80e-07!59;CL:0000393!3.08e-07!60;CL:0000211!3.08e-07!60;CL:0000625!4.53e-07!11 | |ontology_enrichment_celltype=CL:0000048!7.05e-22!430;CL:0000723!1.50e-21!436;CL:0000034!2.16e-21!444;CL:0000144!9.98e-20!625;CL:0000055!8.18e-18!180;CL:0002371!9.39e-18!591;CL:0000219!5.07e-15!390;CL:0000003!6.51e-15!722;CL:0000134!4.90e-13!358;CL:0002320!1.87e-12!365;CL:0000542!9.34e-12!53;CL:0000051!9.34e-12!53;CL:0000838!2.59e-11!52;CL:0000084!8.57e-11!25;CL:0000827!8.57e-11!25;CL:0000548!8.64e-11!679;CL:0000004!8.64e-11!679;CL:0000255!8.64e-11!679;CL:0000012!1.27e-10!682;CL:0000791!2.02e-10!18;CL:0000789!2.02e-10!18;CL:0002420!2.02e-10!18;CL:0002419!2.02e-10!18;CL:0000790!2.02e-10!18;CL:0000057!4.75e-09!75;CL:0000222!1.14e-08!119;CL:0000192!7.66e-08!42;CL:0000514!7.66e-08!42;CL:0000680!8.66e-08!57;CL:0000056!8.66e-08!57;CL:0000355!8.66e-08!57;CL:0000081!1.99e-07!11;CL:0000187!2.44e-07!54;CL:0000183!2.80e-07!59;CL:0000393!3.08e-07!60;CL:0000211!3.08e-07!60;CL:0000625!4.53e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.86e-11;25!CL:0000791;2.03e-10;18!CL:0000789;2.03e-10;18!CL:0002419;2.03e-10;18!CL:0000081;2.27e-07;11!CL:0000625;4.42e-07;11!CL:0000542;5.04e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.94e-21,427;CL:0000723,1.04e-20,433;CL:0000034,1.50e-20,441;CL:0000219,1.12e-14,386;CL:0000134,1.00e-12,354;CL:0002320,3.78e-12,361;CL:0000542,1.05e-11,53;CL:0000051,1.05e-11,53;CL:0000838,2.91e-11,52;CL:0000084,8.36e-11,25;CL:0000827,8.36e-11,25;CL:0000791,1.97e-10,18;CL:0000789,1.97e-10,18;CL:0002420,1.97e-10,18;CL:0002419,1.97e-10,18;CL:0000790,1.97e-10,18;CL:0000057,1.78e-09,76;CL:0000222,2.96e-08,121;CL:0000081,1.96e-07,11;CL:0000680,2.92e-07,58;CL:0000056,2.92e-07,58;CL:0000355,2.92e-07,58;CL:0000192,3.69e-07,43;CL:0000514,3.69e-07,43;CL:0000625,4.46e-07,11;CL:0000187,8.10e-07,55;CL:0000393,9.43e-07,61;CL:0000211,9.43e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;2.03e-10;18!CL:0000051;5.04e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.74e-12!110;UBERON:0002384!4.09e-12!375;UBERON:0000178!6.33e-11!15;UBERON:0000179!6.33e-11!15;UBERON:0000463!6.33e-11!15;UBERON:0001009!8.64e-11!113;UBERON:0004290!1.78e-07!70;UBERON:0000914!1.92e-07!83;UBERON:0002329!1.92e-07!83;UBERON:0003077!1.92e-07!83;UBERON:0003059!1.92e-07!83;UBERON:0007282!1.92e-07!83;UBERON:0009618!1.92e-07!83;UBERON:0007285!1.92e-07!83;UBERON:0002049!4.33e-07!79;UBERON:0007798!4.33e-07!79 | |ontology_enrichment_uberon=UBERON:0004535!2.74e-12!110;UBERON:0002384!4.09e-12!375;UBERON:0000178!6.33e-11!15;UBERON:0000179!6.33e-11!15;UBERON:0000463!6.33e-11!15;UBERON:0001009!8.64e-11!113;UBERON:0004290!1.78e-07!70;UBERON:0000914!1.92e-07!83;UBERON:0002329!1.92e-07!83;UBERON:0003077!1.92e-07!83;UBERON:0003059!1.92e-07!83;UBERON:0007282!1.92e-07!83;UBERON:0009618!1.92e-07!83;UBERON:0007285!1.92e-07!83;UBERON:0002049!4.33e-07!79;UBERON:0007798!4.33e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.24e-11;15!UBERON:0000179;5.24e-11;15!UBERON:0000463;5.24e-11;15!UBERON:0002390;1.57e-09;32!UBERON:0002193;5.99e-08;42 | |||
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| ||
|short_description=p2@XPO6 | |short_description=p2@XPO6 | ||
}} | }} |
Latest revision as of 23:31, 15 September 2015
Short description: | p2@XPO6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XPO6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000304658, NM_015171, uc002dpa.1, uc002dpb.1, uc010vcp.1_5end |
EntrezGene: | XPO6 |
HGNC: | 19733 |
UniProt: | Q96QU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.94e-21 | 427 |
somatic stem cell | 1.04e-20 | 433 |
stem cell | 1.50e-20 | 441 |
motile cell | 1.12e-14 | 386 |
mesenchymal cell | 1.00e-12 | 354 |
connective tissue cell | 3.78e-12 | 361 |
lymphocyte | 1.05e-11 | 53 |
common lymphoid progenitor | 1.05e-11 | 53 |
lymphoid lineage restricted progenitor cell | 2.91e-11 | 52 |
T cell | 8.36e-11 | 25 |
pro-T cell | 8.36e-11 | 25 |
mature alpha-beta T cell | 1.97e-10 | 18 |
alpha-beta T cell | 1.97e-10 | 18 |
immature T cell | 1.97e-10 | 18 |
mature T cell | 1.97e-10 | 18 |
immature alpha-beta T cell | 1.97e-10 | 18 |
fibroblast | 1.78e-09 | 76 |
mesodermal cell | 2.96e-08 | 121 |
blood cell | 1.96e-07 | 11 |
muscle precursor cell | 2.92e-07 | 58 |
myoblast | 2.92e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.92e-07 | 58 |
smooth muscle cell | 3.69e-07 | 43 |
smooth muscle myoblast | 3.69e-07 | 43 |
CD8-positive, alpha-beta T cell | 4.46e-07 | 11 |
muscle cell | 8.10e-07 | 55 |
electrically responsive cell | 9.43e-07 | 61 |
electrically active cell | 9.43e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.19e-12 | 109 |
connective tissue | 8.26e-12 | 371 |
blood | 6.18e-11 | 15 |
haemolymphatic fluid | 6.18e-11 | 15 |
organism substance | 6.18e-11 | 15 |
circulatory system | 1.89e-10 | 112 |
epithelial vesicle | 3.43e-07 | 78 |
dense mesenchyme tissue | 4.95e-07 | 73 |
somite | 5.23e-07 | 71 |
presomitic mesoderm | 5.23e-07 | 71 |
presumptive segmental plate | 5.23e-07 | 71 |
dermomyotome | 5.23e-07 | 71 |
trunk paraxial mesoderm | 5.23e-07 | 71 |
paraxial mesoderm | 7.22e-07 | 72 |
presumptive paraxial mesoderm | 7.22e-07 | 72 |
vasculature | 9.57e-07 | 78 |
vascular system | 9.57e-07 | 78 |