FFCP PHASE1:Hg19::chr11:64902444..64902476,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:64902444..64902476,-
|short_description=p10@SYVN1
|description=CAGE_peak_10_at_SYVN1_5end
|association_with_transcript=-440bp_to_ENST00000377190,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84447 | |EntrezGene=84447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20738 | |HGNC=20738 | ||
|UniProt=Q86TM6, | |TSSclassifier=strong | ||
|UniProt=Q86TM6,E9PHC7 | |||
|association_with_transcript=-440bp_to_ENST00000377190,ENST00000434219_5end | |||
|cluster_id=chr11:64902444..64902476,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_10_at_SYVN1_5end | |||
|id=chr11:64902444..64902476,- | |||
|ontology_enrichment_celltype=CL:0000738!3.79e-22!140;CL:0000037!1.73e-20!172;CL:0000566!1.73e-20!172;CL:0000988!9.84e-19!182;CL:0002032!4.21e-17!165;CL:0000837!4.21e-17!165;CL:0002031!1.32e-16!124;CL:0002087!2.67e-16!119;CL:0000766!6.99e-10!76;CL:0000542!2.09e-09!53;CL:0000051!2.09e-09!53;CL:0000838!5.38e-09!52;CL:0000557!1.17e-08!71;CL:0000763!1.33e-08!112;CL:0000049!1.33e-08!112;CL:0002057!2.16e-08!42;CL:0000624!3.60e-08!6;CL:0000860!5.24e-08!45;CL:0002009!2.14e-07!65;CL:0000839!2.65e-07!70;CL:0000134!5.23e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.77e-28;6!CL:0000791;2.53e-20;18!CL:0000789;2.53e-20;18!CL:0002419;2.53e-20;18!CL:0000623;8.74e-16;3!CL:0000784;5.74e-15;3!CL:0000898;5.88e-15;3!CL:0000767;1.55e-14;3!CL:0000094;2.22e-14;8!CL:0000084;3.54e-14;25!CL:0000081;2.16e-10;11!CL:0000815;2.45e-10;2!CL:0000792;2.45e-10;2!CL:0002677;2.45e-10;2!CL:0000542;4.54e-09;53!CL:0002393;1.58e-07;6!CL:0002397;1.58e-07;6!CL:0000451;3.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.52e-28,6;CL:0000738,7.34e-21,136;CL:0000791,2.16e-20,18;CL:0000789,2.16e-20,18;CL:0002420,2.16e-20,18;CL:0002419,2.16e-20,18;CL:0000790,2.16e-20,18;CL:0000037,3.76e-17,168;CL:0000988,5.90e-16,177;CL:0000623,9.20e-16,3;CL:0000825,9.20e-16,3;CL:0000784,3.57e-15,3;CL:0000838,3.94e-15,52;CL:0000898,6.95e-15,3;CL:0000542,8.69e-15,53;CL:0000051,8.69e-15,53;CL:0000767,1.41e-14,3;CL:0000094,1.65e-14,8;CL:0000084,3.16e-14,25;CL:0000827,3.16e-14,25;CL:0002032,1.28e-12,161;CL:0000837,1.28e-12,161;CL:0002087,1.00e-11,115;CL:0002031,3.57e-11,120;CL:0000081,1.74e-10,11;CL:0000815,3.18e-10,2;CL:0000792,3.18e-10,2;CL:0002677,3.18e-10,2;CL:0000451,2.69e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;2.53e-20;18!CL:0000051;4.54e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-07!102;UBERON:0003061!1.23e-07!102;UBERON:0002371!2.54e-07!80;UBERON:0001474!3.81e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.314843125254717,3.54027849164014,2.68680578668049,2.63187409637329,0,0,0,0,0.142169232487422,3.52320527201817,1.10799081706375,3.00816671205213,3.25516306073778,0,0,0,0,0,0.727752183563449,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.709446689665756,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0.449446968890169,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0.628975936525128,0.336985893439485,0,0,0.570025487482497,0,0,0,1.09227722252426,0.889509253863555,2.98711155796555,0,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,3.36305137788922,0.263384084775077,1.96709770113833,3.93010762749165,9.66327045297693,0,3.2592226663359,3.31413464014313,0,0.445641827540694,2.3568472597987,1.10766947291811,1.89562704635511,0.128091319725675,0.390178042679635,0.493313713811028,0.552700035571697,0.289803085735052,5.04174314751005,4.81573490561484,3.1360657141493,0.226618685395132,4.98186641682498,4.46715679127419,3.28925599625354,0,0,0,0,0,0,0,0,6.45141578319144,7.48832548193821,4.19990771260117,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,3.57735936458013,3.43196946468077,3.71457501329565,0,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.985326475791887,0,0.621984346622316,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,6.10795356625974,4.31255149719035,5.90377966886842,0,1.30139853857622,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0.709522128141196,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.28853842595289,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.921482106297696,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.557694977114413,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0.317873157960757,0,0.326465616318295,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,1.07791637155815,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.599428828746391,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0,0.0674035438541849,0.492137407573744,0.0846733320657845,0,0.272406812223151,0,0,0,0.899895566206002,9.2856234546954,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0,0,0.509197589862076,0,0.247871528518004,0.558644917973244,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.707818340086442,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.413373593002368,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.460935950223117,0,0,0.0657727735628491,0,0.111231401892069,0,0,0.840816489941367,0,0.215927591218621,0,0,0.158013611732727,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0,3.2074961596167,0,0,0.111855431797792,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0.705789743431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| ||
|short_description=p10@SYVN1 | |||
}} | }} |
Latest revision as of 06:40, 19 September 2015
Short description: | p10@SYVN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYVN1_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -440bp_to_ENST00000377190, ENST00000434219_5end |
EntrezGene: | SYVN1 |
HGNC: | 20738 |
UniProt: | Q86TM6E9PHC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.52e-28 | 6 |
leukocyte | 7.34e-21 | 136 |
mature alpha-beta T cell | 2.16e-20 | 18 |
alpha-beta T cell | 2.16e-20 | 18 |
immature T cell | 2.16e-20 | 18 |
mature T cell | 2.16e-20 | 18 |
immature alpha-beta T cell | 2.16e-20 | 18 |
hematopoietic stem cell | 3.76e-17 | 168 |
hematopoietic cell | 5.90e-16 | 177 |
natural killer cell | 9.20e-16 | 3 |
pro-NK cell | 9.20e-16 | 3 |
plasmacytoid dendritic cell | 3.57e-15 | 3 |
lymphoid lineage restricted progenitor cell | 3.94e-15 | 52 |
naive T cell | 6.95e-15 | 3 |
lymphocyte | 8.69e-15 | 53 |
common lymphoid progenitor | 8.69e-15 | 53 |
basophil | 1.41e-14 | 3 |
granulocyte | 1.65e-14 | 8 |
T cell | 3.16e-14 | 25 |
pro-T cell | 3.16e-14 | 25 |
hematopoietic oligopotent progenitor cell | 1.28e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-12 | 161 |
nongranular leukocyte | 1.00e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 3.57e-11 | 120 |
blood cell | 1.74e-10 | 11 |
regulatory T cell | 3.18e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.18e-10 | 2 |
naive regulatory T cell | 3.18e-10 | 2 |
dendritic cell | 2.69e-07 | 10 |