FFCP PHASE1:Hg19::chr20:17831019..17831039,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:17831019..17831039,- | |||
|description=CAGE_peak_at_chr20:17831019..17831039,- | |description=CAGE_peak_at_chr20:17831019..17831039,- | ||
|id=chr20:17831019..17831039,- | |id=chr20:17831019..17831039,- | ||
|ontology_enrichment_celltype=CL:0002620!1.63e-17!23;CL:0000057!8.25e-13!75;CL:0000055!7.59e-09!180 | |ontology_enrichment_celltype=CL:0002620!1.63e-17!23;CL:0000057!8.25e-13!75;CL:0000055!7.59e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000346;3.98e-11;3!CL:1000428;3.98e-11;3!CL:0000222;5.74e-09;1!CL:0002620;3.31e-08;23!CL:0002559;5.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.78e-11,3;CL:1000428,2.78e-11,3;CL:0002620,3.19e-08,23;CL:0002559,4.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.63e-07!5;DOID:450!5.63e-07!5;DOID:66!5.63e-07!5;DOID:423!5.63e-07!5;DOID:0080000!5.63e-07!5;DOID:11722!5.63e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4231;1.42e-16;2!DOID:1907;1.42e-16;2!DOID:201;3.45e-12;6!DOID:0060100;3.45e-12;6!DOID:6193;1.88e-09;1!DOID:1799;5.74e-09;1!DOID:10165;5.74e-09;1!DOID:1798;5.74e-09;1!DOID:17;5.15e-07;5!DOID:450;5.15e-07;5!DOID:66;5.15e-07;5!DOID:423;5.15e-07;5!DOID:0080000;5.15e-07;5!DOID:11722;5.15e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.48e-16,2;DOID:1907,1.48e-16,2;DOID:201,4.44e-12,6;DOID:0060100,4.44e-12,6;DOID:6193,1.89e-09,1;DOID:1799,3.05e-09,1;DOID:10165,3.05e-09,1;DOID:1798,3.05e-09,1;DOID:17,4.16e-07,5;DOID:450,4.16e-07,5;DOID:66,4.16e-07,5;DOID:423,4.16e-07,5;DOID:0080000,4.16e-07,5;DOID:11722,4.16e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.30e-17!40;UBERON:0002199!2.63e-15!45;UBERON:0002416!2.63e-15!45;UBERON:0003102!9.21e-13!95;UBERON:0004923!1.44e-07!57;UBERON:0002067!5.73e-07!9;UBERON:0004016!5.73e-07!9;UBERON:0010083!5.73e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.98e-11;3!UBERON:0001992;3.98e-11;3!UBERON:0002097;5.05e-10;41!UBERON:0007195;5.74e-09;1!UBERON:0002199;2.53e-07;46!UBERON:0002416;2.53e-07;46!UBERON:0002073;5.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.78e-11,3;UBERON:0001992,2.78e-11,3;UBERON:0002097,6.97e-11,41;UBERON:0002199,1.39e-09,46;UBERON:0002416,1.39e-09,46;UBERON:0007195,1.07e-08,1;UBERON:0002073,4.16e-07,5;UBERON:0005086,4.16e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0.90361775633475,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,1.71007646244749,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0,0.408308342509787,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0.150238058906597,0,1.4351170855109,0.213557388818567,0.211931901159562,1.50045548042201,0.309157587715317,0.515281080091258,0.37223371266318,1.18143432568886,0.194874010322397,0.757301322732344,0.552299391853796,0,0,0,0.508681776931463,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.53735113621709,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,7.15312891703765,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0.307007349452259,0.413509717453592,0.429680979473094,0.145016693914229,0.255679882248303,0.267096106940212,0,0,2.04180339991335,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.823611089208164,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0,0,0,0.0769502585037971,0.797594390929008,1.84451123510448,3.05175990993225,0.108647371922008,0.957003479195758,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.957651272384428,0,4.29965081179041,0,0,0,0,0,0,1.37041924646751,0.397429223405979,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0.604923695052956,0.15543720058278,0.295710299979268,0.318593534327405,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0.686791410365586,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0.358177682162975,1.54400723580486,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,2.83757976783418,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0,0.366857197043358,0,1.1441462864015,0,0,0.0752103283492573,0,0,1.83334686136996,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,8.11658204946091,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,1.23345048838675,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0.90361775633475,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,1.71007646244749,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0,0.408308342509787,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0.150238058906597,0,1.4351170855109,0.213557388818567,0.211931901159562,1.50045548042201,0.309157587715317,0.515281080091258,0.37223371266318,1.18143432568886,0.194874010322397,0.757301322732344,0.552299391853796,0,0,0,0.508681776931463,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.53735113621709,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,7.15312891703765,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0.307007349452259,0.413509717453592,0.429680979473094,0.145016693914229,0.255679882248303,0.267096106940212,0,0,2.04180339991335,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.823611089208164,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0,0,0,0.0769502585037971,0.797594390929008,1.84451123510448,3.05175990993225,0.108647371922008,0.957003479195758,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.957651272384428,0,4.29965081179041,0,0,0,0,0,0,1.37041924646751,0.397429223405979,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0.604923695052956,0.15543720058278,0.295710299979268,0.318593534327405,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0.686791410365586,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0.358177682162975,1.54400723580486,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,2.83757976783418,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0,0.366857197043358,0,1.1441462864015,0,0,0.0752103283492573,0,0,1.83334686136996,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,8.11658204946091,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,1.23345048838675,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:17831019..17831039,- | |short_description=p@chr20:17831019..17831039,- | ||
}} | }} |
Latest revision as of 12:06, 28 July 2015
Short description: | p@chr20:17831019..17831039, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:17831019..17831039, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.78e-11 | 3 |
stem cell of epidermis | 2.78e-11 | 3 |
skin fibroblast | 3.19e-08 | 23 |
hair follicle cell | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.78e-11 | 3 |
papillary layer of dermis | 2.78e-11 | 3 |
skin of body | 6.97e-11 | 41 |
integument | 1.39e-09 | 46 |
integumental system | 1.39e-09 | 46 |
stroma of bone marrow | 1.07e-08 | 1 |
hair follicle | 4.16e-07 | 5 |
hair follicle placode | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.48e-16 | 2 |
malignant fibroxanthoma | 1.48e-16 | 2 |
connective tissue cancer | 4.44e-12 | 6 |
musculoskeletal system cancer | 4.44e-12 | 6 |
epithelioid sarcoma | 1.89e-09 | 1 |
islet cell tumor | 3.05e-09 | 1 |
endocrine pancreas cancer | 3.05e-09 | 1 |
pancreatic endocrine carcinoma | 3.05e-09 | 1 |
musculoskeletal system disease | 4.16e-07 | 5 |
myotonic disease | 4.16e-07 | 5 |
muscle tissue disease | 4.16e-07 | 5 |
myopathy | 4.16e-07 | 5 |
muscular disease | 4.16e-07 | 5 |
myotonic dystrophy | 4.16e-07 | 5 |