FFCP PHASE1:Hg19::chr17:43325288..43325306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100133991 | |EntrezGene=100133991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_024434,uc010dah.2_5end | |association_with_transcript=0bp_to_NR_024434,uc010dah.2_5end | ||
|cluster_id=chr17:43325288..43325306,+ | |||
|description=CAGE_peak_2_at_LOC100133991_5end | |description=CAGE_peak_2_at_LOC100133991_5end | ||
|id=chr17:43325288..43325306,+ | |id=chr17:43325288..43325306,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.18e-17!52;CL:0000542!3.78e-17!53;CL:0000051!3.78e-17!53;CL:0000066!1.21e-12!254;CL:0000084!2.13e-12!25;CL:0000827!2.13e-12!25;CL:0000791!1.29e-10!18;CL:0000789!1.29e-10!18;CL:0002420!1.29e-10!18;CL:0002419!1.29e-10!18;CL:0000790!1.29e-10!18;CL:0002076!1.16e-07!43 | |ontology_enrichment_celltype=CL:0000838!2.18e-17!52;CL:0000542!3.78e-17!53;CL:0000051!3.78e-17!53;CL:0000066!1.21e-12!254;CL:0000084!2.13e-12!25;CL:0000827!2.13e-12!25;CL:0000791!1.29e-10!18;CL:0000789!1.29e-10!18;CL:0002420!1.29e-10!18;CL:0002419!1.29e-10!18;CL:0000790!1.29e-10!18;CL:0002076!1.16e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.23e-15;25!CL:0000791;9.12e-14;18!CL:0000789;9.12e-14;18!CL:0002419;9.12e-14;18!CL:0000542;1.96e-10;53!CL:0000625;3.43e-08;11!CL:0000624;6.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.39e-18,52;CL:0000542,5.84e-18,53;CL:0000051,5.84e-18,53;CL:0000084,1.19e-15,25;CL:0000827,1.19e-15,25;CL:0000791,3.60e-14,18;CL:0000789,3.60e-14,18;CL:0002420,3.60e-14,18;CL:0002419,3.60e-14,18;CL:0000790,3.60e-14,18;CL:0000625,3.67e-08,11;CL:0000624,3.88e-07,6;CL:0002076,5.31e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;9.12e-14;18!CL:0000051;1.96e-10;53 | |||
|ontology_enrichment_disease=DOID:162!7.00e-10!235;DOID:305!1.05e-09!106;DOID:14566!8.62e-09!239;DOID:0050687!4.28e-07!143 | |ontology_enrichment_disease=DOID:162!7.00e-10!235;DOID:305!1.05e-09!106;DOID:14566!8.62e-09!239;DOID:0050687!4.28e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.44e-11!169;UBERON:0000925!4.44e-11!169;UBERON:0006595!4.44e-11!169;UBERON:0004921!2.75e-09!129;UBERON:0004185!2.75e-09!129;UBERON:0001004!4.45e-09!72;UBERON:0001007!1.34e-08!155;UBERON:0001555!1.34e-08!155;UBERON:0007026!1.34e-08!155;UBERON:0000065!5.08e-08!53;UBERON:0000077!7.03e-08!130;UBERON:0001041!3.62e-07!98;UBERON:0005911!6.80e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,6.97801167972428,1.31064823278103,2.37390280405608,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,0.408001382488506,0,0.286235987131057,0.410623275218653,0.125542639594803,1.29902789771517,1.64201178899891,0.865818594450472,0.786728553697808,0.767658796194425,0.619264493264304,3.67768489791571,0.6024118375565,1.84877005083394,0.309868802321207,0.284338464974843,0.293600439334847,1.10799081706375,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,1.75996244461323,3.82297027883492,3.55803701545422,1.70692089026603,3.2031678962881,1.14950487990897,0.661044872784862,2.86216126360609,1.70763890732835,0,2.6759125968766,0,1.12101712596307,0.790152254325231,4.72103448273199,3.93010762749165,2.87842098599313,3.8452893939856,4.23698946623668,6.62826928028627,3.89653456815823,2.89667187901451,2.94605907474837,2.43687284041983,2.97884250141517,2.0494611156108,2.21100890851793,2.30213066445147,2.76350017785848,4.34704628602579,6.67289534229272,7.49114318651197,8.36284190439814,2.03956816855619,3.44898444241729,3.77990190030893,3.28925599625354,2.54852331459277,4.55758417699493,2.85135613334512,3.76437797694432,4.09557155694139,3.74792179657038,1.18388626022008,1.64225599384209,2.01606743224732,0.802320587350522,5.35850294366356,0,1.34140171940727,0.639312809217652,0,0,0.144846518960824,0,0.973269740605272,0.661743720148475,0.665188192387692,0.614843499851882,0.523916301990851,3.64295288292542,4.07862887062872,1.29818957461873,0.870648686496336,0.664789802594326,1.90792499444274,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,2.18047026071267,0,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.404132016209064,0,0.756787138224657,0,0.468642863667593,0,0,0,0,0,0,0.816616685019573,0.245668634623536,0.619954687054593,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0,0.323292113637624,0,0,0.169560592310488,1.35282597214308,0.272746120590835,1.14721838155602,1.21973706129595,1.19276791489337,0.232387885739037,1.65857688024593,2.01856680700503,0.36497735907583,0,0,0,0,0,0.354920400119532,0.842923450390509,0.482022059766964,0.330881918197182,0.435758888184812,0.71181185733329,0.539325232640658,0.196221465125346,1.15424147083917,0,0,0.4115740113314,0,0,0,0.590789906681404,0,1.72183813960359,0.686271241194102,2.41450627898976,1.1240175325762,1.70899253099772,1.75918045801206,0.325808305310325,0,1.44331342025273,0.463721619900307,0.234817388471643,0.288732895522148,0,0.380508304469197,2.37061319387782,1.71697232418975,0,0,0.148631162288728,0.93733833986777,2.18376766658517,1.55952606966625,0.626909658919938,0.290633938513962,0.766765358330422,0.492663237895943,1.84901711427775,1.24396869324463,2.01767934783746,2.39860623510122,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0.448524337381443,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,1.42977993658148,1.62786481617433,2.46972101034231,0,0.710783897485092,0.791951872933429,1.20575750823834,1.74306691720059,0.499864955910285,0,0,2.10833939483032,0,0,0,0,0,0,1.90544744788996,0.985153801009636,1.50939302401662,1.54011643535698,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0.783204629850962,0.343143423810856,1.6541442089831,1.72571360654893,2.02782359826544,1.21251028578504,0,0.907170879989041,0,0,0,0,0,0,1.48418066444991,0,0,0,0.519254429183621,0.116210378459959,0.966875596732978,1.40354529212299,1.28913384510255,0.574072240823034,0,0.262248829918848,2.70719767744447,2.23344477602803,1.56869953835371,0,1.89992932007176,0,0.170093705276516,0,0,0.541892875087706,3.51182841698397,1.01950509218015,0.831076008928724,0.671624264166535,0.438519753291869,0,0.769350375349168,0,1.30151357865721,0.206082023295445,0,0.082509499920588,2.87132768998086,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,2.64455864577565,0.960950336825531,3.44554323735377,2.12431339796655,0,0,0,0.308033580176089,1.59691809095107,0.869932992075073,0.18532421910392,0,0.372158369359667,0.632758849437452,0.38126038784765,0.511795582622668,0,0,0,0.539617372749944,0.54907405947211,0.353437207037059,0,0,0,1.95053495635836,0,0,0.409499734223957,1.1312434556297,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.430234056612155,0.491245205065606,0,0.709522128141196,0,0.329294892959902,0,1.04980416073495,1.53955380360819,2.01090682660736,1.08890984861323,0.470719003883896,9.04061282609583,3.36942951335251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| ||
|short_description=p2@LOC100133991 | |short_description=p2@LOC100133991 | ||
}} | }} |
Latest revision as of 01:36, 25 September 2015
Short description: | p2@LOC100133991 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100133991_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_024434, uc010dah.2_5end |
EntrezGene: | LOC100133991 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.39e-18 | 52 |
lymphocyte | 5.84e-18 | 53 |
common lymphoid progenitor | 5.84e-18 | 53 |
T cell | 1.19e-15 | 25 |
pro-T cell | 1.19e-15 | 25 |
mature alpha-beta T cell | 3.60e-14 | 18 |
alpha-beta T cell | 3.60e-14 | 18 |
immature T cell | 3.60e-14 | 18 |
mature T cell | 3.60e-14 | 18 |
immature alpha-beta T cell | 3.60e-14 | 18 |
CD8-positive, alpha-beta T cell | 3.67e-08 | 11 |
CD4-positive, alpha-beta T cell | 3.88e-07 | 6 |
endo-epithelial cell | 5.31e-07 | 42 |