FFCP PHASE1:Hg19::chr17:6544113..6544125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84817 | |EntrezGene=84817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28218 | |HGNC=28218 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRA2 | |UniProt=Q9BRA2 | ||
|association_with_transcript=35bp_to_ENST00000250101_5end | |association_with_transcript=35bp_to_ENST00000250101_5end | ||
|cluster_id=chr17:6544113..6544125,+ | |||
|description=CAGE_peak_4_at_TXNDC17_5end | |description=CAGE_peak_4_at_TXNDC17_5end | ||
|id=chr17:6544113..6544125,+ | |id=chr17:6544113..6544125,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.81e-18!254;CL:0002076!4.43e-15!43;CL:0000223!3.38e-13!59;CL:0002251!5.14e-10!21;CL:0002159!1.63e-07!13 | |ontology_enrichment_celltype=CL:0000066!5.81e-18!254;CL:0002076!4.43e-15!43;CL:0000223!3.38e-13!59;CL:0002251!5.14e-10!21;CL:0002159!1.63e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.14e-10;42!CL:0000624;1.56e-09;6!CL:0002231;1.88e-09;3!CL:0000791;3.99e-08;18!CL:0000789;3.99e-08;18!CL:0002419;3.99e-08;18!CL:0002368;2.51e-07;13!CL:0002252;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.84e-12,42;CL:0000624,1.37e-09,6;CL:0002231,1.89e-09,3;CL:0000223,1.54e-08,58;CL:0000791,3.56e-08,18;CL:0000789,3.56e-08,18;CL:0002420,3.56e-08,18;CL:0002419,3.56e-08,18;CL:0000790,3.56e-08,18;CL:0002368,1.67e-07,13;CL:0002252,2.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.99e-08;18!UBERON:0009143;3.84e-07;1 | |||
|ontology_enrichment_disease=DOID:305!5.11e-22!106;DOID:0050687!4.91e-15!143;DOID:1749!4.35e-13!14 | |ontology_enrichment_disease=DOID:305!5.11e-22!106;DOID:0050687!4.91e-15!143;DOID:1749!4.35e-13!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!5.09e-16!72;UBERON:0004119!1.33e-12!169;UBERON:0000925!1.33e-12!169;UBERON:0006595!1.33e-12!169;UBERON:0000065!1.63e-12!53;UBERON:0000072!9.57e-11!46;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0004921!1.78e-09!129;UBERON:0004185!1.78e-09!129;UBERON:0001557!2.10e-09!19;UBERON:0000077!4.97e-09!130;UBERON:0001041!7.92e-09!98;UBERON:0001737!1.11e-07!9;UBERON:0008947!1.27e-07!38;UBERON:0003258!1.27e-07!38;UBERON:0000344!1.41e-07!12;UBERON:0000161!2.94e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;2.75e-09;6!UBERON:0001043;1.05e-08;3!UBERON:0003343;9.92e-07;4!UBERON:0004785;9.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,8.03e-09,3;UBERON:0009143,8.03e-09,3 | |||
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| ||
|short_description=p4@TXNDC17 | |short_description=p4@TXNDC17 | ||
}} | }} |
Latest revision as of 22:10, 16 September 2015
Short description: | p4@TXNDC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TXNDC17_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000250101_5end |
EntrezGene: | TXNDC17 |
HGNC: | 28218 |
UniProt: | Q9BRA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.84e-12 | 42 |
CD4-positive, alpha-beta T cell | 1.37e-09 | 6 |
epithelial cell of prostate | 1.89e-09 | 3 |
endodermal cell | 1.54e-08 | 58 |
mature alpha-beta T cell | 3.56e-08 | 18 |
alpha-beta T cell | 3.56e-08 | 18 |
immature T cell | 3.56e-08 | 18 |
mature T cell | 3.56e-08 | 18 |
immature alpha-beta T cell | 3.56e-08 | 18 |
respiratory epithelial cell | 1.67e-07 | 13 |
epithelial cell of esophagus | 2.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
esophagus | 8.03e-09 | 3 |
esophageal region | 8.03e-09 | 3 |