FFCP PHASE1:Hg19::chr17:6659153..6659164,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54739 | |EntrezGene=54739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30932 | |HGNC=30932 | ||
|TSSclassifier=strong | |||
|UniProt=Q6GPH4,C9J7Z8,C9K044,B3KPW1 | |UniProt=Q6GPH4,C9J7Z8,C9K044,B3KPW1 | ||
|association_with_transcript=0bp_to_ENST00000346752,ENST00000361842,ENST00000438512,ENST00000441631,NM_017523,NM_199139,uc002gdm.1,uc002gdn.2,uc002gdo.2_5end | |association_with_transcript=0bp_to_ENST00000346752,ENST00000361842,ENST00000438512,ENST00000441631,NM_017523,NM_199139,uc002gdm.1,uc002gdn.2,uc002gdo.2_5end | ||
|cluster_id=chr17:6659153..6659164,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_XAF1_5end | |description=CAGE_peak_6_at_XAF1_5end | ||
|id=chr17:6659153..6659164,+ | |id=chr17:6659153..6659164,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.36e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.36e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0008801;8.18e-17;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;4.76e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.10e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0003080!1.65e-07!42;UBERON:0001893!1.69e-07!34;UBERON:0007023!2.28e-07!115;UBERON:0002619!2.75e-07!22;UBERON:0001049!3.23e-07!57;UBERON:0005068!3.23e-07!57;UBERON:0006241!3.23e-07!57;UBERON:0007135!3.23e-07!57;UBERON:0001950!4.30e-07!20;UBERON:0002791!4.50e-07!33;UBERON:0002780!6.87e-07!41;UBERON:0001890!6.87e-07!41;UBERON:0006240!6.87e-07!41;UBERON:0001869!7.74e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;8.18e-17;1!UBERON:0001567;8.18e-17;1!UBERON:0002423;1.60e-15;25!UBERON:0002107;1.93e-13;19!UBERON:0006925;1.93e-13;19!UBERON:0002365;5.34e-13;31!UBERON:0002330;5.34e-13;31!UBERON:0001829;4.52e-09;2!UBERON:0004089;4.52e-09;2!UBERON:0002368;5.00e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.25e-17,22;UBERON:0003894,1.25e-17,22;UBERON:0009854,7.26e-17,23;UBERON:0001831,8.86e-17,1;UBERON:0001567,8.86e-17,1;UBERON:0008801,8.86e-17,1;UBERON:0007499,1.60e-15,25;UBERON:0009497,1.60e-15,25;UBERON:0000015,1.60e-15,25;UBERON:0002423,1.60e-15,25;UBERON:0006235,1.60e-15,25;UBERON:0004161,1.60e-15,25;UBERON:0009856,6.29e-15,26;UBERON:0002107,1.90e-13,19;UBERON:0006925,1.90e-13,19;UBERON:0008836,1.90e-13,19;UBERON:0002365,1.40e-12,31;UBERON:0002330,1.40e-12,31;UBERON:0001829,4.70e-09,2;UBERON:0004089,4.70e-09,2;UBERON:0002368,2.04e-07,35;UBERON:0003929,3.52e-07,54 | |||
|phase1_expression=0.726713517082227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.668745981562712,0,0,0,0.222820913770347,0.589211814949674,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0.552700035571697,0.579606171470105,0.14828656316206,0,0,0.339928028092699,0.766440987203842,0,0.506039384039006,0,1.30216690771284,0,0,0.255973222308837,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.450445921933289,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.276149695926898,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,3.9313088667105,4.72631925345123,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,1.17587489739202,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,0.621984346622316,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0,0,0,0,0,0.992431231275107,0.61384789315225,0,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0.714695326373367,0,0.648473311192717,0,0,0,0,0,0,0.28853842595289,0.213425530045242,0.637705090915289,0,0.191505370132367,1.05836791361941,0,1.12318871245384,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0.811367035427949,0,1.4098700508785,0.37428108081644,0,0,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,1.25815691606258,0.179021174675609,0,0,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.784901281975124,0.997270091400938,0,0,0,0,1.74830236878417,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.253243183823515,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0.338693328263138,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0.453248366080503,2.4913879725274,0,0.129282956361551,0.26446520348538,0,0,0.320362237703084,0.157204305099666,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0,0.886068179966986,0.244052529803926,0.625954653532499,0,0.110929051536852,0.310482014706917,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,1.37358282073117,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0.353378291891762,0,0,0,0,0,0.553033744606923,0,0,0,0.982829546539238,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.157723490002507,0,0,0,0.321146125482298,0,0.319267718114302,0.615349092722265,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0,0,0,0,0.295712172434091,0.202612753855184,0,0.413373593002368,0.317079050969534,0,2.19303106742873,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0.171488009437418,0.543757863814654,0.131545547125698,0,0,0,0.314231179832004,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| ||
|short_description=p6@XAF1 | |short_description=p6@XAF1 | ||
}} | }} |
Latest revision as of 00:24, 17 September 2015
Short description: | p6@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_XAF1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000346752, ENST00000361842, ENST00000438512, ENST00000441631, NM_017523, NM_199139, uc002gdm.1, uc002gdn.2, uc002gdo.2_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | Q6GPH4C9J7Z8C9K044B3KPW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.36e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 1.25e-17 | 22 |
liver primordium | 1.25e-17 | 22 |
digestive tract diverticulum | 7.26e-17 | 23 |
parotid gland | 8.86e-17 | 1 |
cheek | 8.86e-17 | 1 |
parotid gland primordium | 8.86e-17 | 1 |
epithelial sac | 1.60e-15 | 25 |
epithelium of foregut-midgut junction | 1.60e-15 | 25 |
anatomical boundary | 1.60e-15 | 25 |
hepatobiliary system | 1.60e-15 | 25 |
foregut-midgut junction | 1.60e-15 | 25 |
septum transversum | 1.60e-15 | 25 |
sac | 6.29e-15 | 26 |
liver | 1.90e-13 | 19 |
digestive gland | 1.90e-13 | 19 |
liver bud | 1.90e-13 | 19 |
exocrine gland | 1.40e-12 | 31 |
exocrine system | 1.40e-12 | 31 |
major salivary gland | 4.70e-09 | 2 |
midface | 4.70e-09 | 2 |
endocrine gland | 2.04e-07 | 35 |
gut epithelium | 3.52e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.10e-08 | 31 |