FFCP PHASE1:Hg19::chr11:85429930..85429939,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:85429930..85429939,-
|short_description=p14@SYTL2
|description=CAGE_peak_14_at_SYTL2_5end
|association_with_transcript=159bp_to_ENST00000530894_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54843 | |EntrezGene=54843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15585 | |HGNC=15585 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=159bp_to_ENST00000530894_5end | |||
|cluster_id=chr11:85429930..85429939,- | |||
|coexpression_cluster_id=C3208 | |||
|description=CAGE_peak_14_at_SYTL2_5end | |||
|id=chr11:85429930..85429939,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.10e-50;1!CL:0000159;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.99e-50,1;CL:0000159,7.14e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.10e-11;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.46e-50;1!DOID:3030;3.10e-50;1!DOID:3350;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.46e-50,1;DOID:3030,3.99e-50,1;DOID:3350,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-28!57;UBERON:0005068!2.11e-28!57;UBERON:0006241!2.11e-28!57;UBERON:0007135!2.11e-28!57;UBERON:0001017!6.36e-27!82;UBERON:0000955!2.39e-25!69;UBERON:0006238!2.39e-25!69;UBERON:0000073!2.90e-25!94;UBERON:0001016!2.90e-25!94;UBERON:0005743!3.01e-25!86;UBERON:0002616!6.11e-25!59;UBERON:0003075!4.23e-22!86;UBERON:0007284!4.23e-22!86;UBERON:0002020!2.14e-21!34;UBERON:0003528!2.14e-21!34;UBERON:0002346!1.01e-20!90;UBERON:0001893!7.66e-19!34;UBERON:0002780!1.24e-18!41;UBERON:0001890!1.24e-18!41;UBERON:0006240!1.24e-18!41;UBERON:0003080!4.52e-18!42;UBERON:0001869!4.90e-18!32;UBERON:0002791!2.92e-17!33;UBERON:0000956!4.11e-16!25;UBERON:0000203!4.11e-16!25;UBERON:0000033!4.98e-16!123;UBERON:0000153!4.99e-16!129;UBERON:0007811!4.99e-16!129;UBERON:0007023!1.72e-15!115;UBERON:0002298!1.22e-14!8;UBERON:0004121!2.93e-14!169;UBERON:0003056!1.07e-13!61;UBERON:0000924!1.09e-13!173;UBERON:0006601!1.09e-13!173;UBERON:0002619!1.12e-13!22;UBERON:0001950!1.32e-12!20;UBERON:0004733!5.94e-12!12;UBERON:0002028!5.94e-12!12;UBERON:0007277!5.94e-12!12;UBERON:0003076!6.37e-12!15;UBERON:0003057!6.37e-12!15;UBERON:0004732!6.41e-11!13;UBERON:0000475!1.00e-08!365;UBERON:0000988!1.50e-08!3;UBERON:0001872!1.74e-08!5;UBERON:0006331!2.68e-08!3;UBERON:0001896!4.08e-08!3;UBERON:0005290!4.08e-08!3;UBERON:0010096!4.08e-08!3;UBERON:0000200!3.27e-07!6;UBERON:0002308!9.78e-07!9;UBERON:0000125!9.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.10e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.94e-11,5;UBERON:0004117,2.94e-11,5;UBERON:0007689,2.94e-11,5;UBERON:0007123,2.94e-11,5;UBERON:0003091,2.94e-11,5 | |||
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| ||
|short_description=p14@SYTL2 | |||
}} | }} |
Latest revision as of 21:13, 24 September 2015
Short description: | p14@SYTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SYTL2_5end |
Coexpression cluster: | C3208_epithelioid_anaplastic_Pancreatic_mucinous_mesenchymal_endometrial_occipital |
Association with transcript: | 159bp_to_ENST00000530894_5end |
EntrezGene: | SYTL2 |
HGNC: | 15585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.99e-50 | 1 |
seromucus secreting cell | 7.14e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.94e-11 | 5 |
pharyngeal pouch | 2.94e-11 | 5 |
thyroid diverticulum | 2.94e-11 | 5 |
pharyngeal pouch 2 | 2.94e-11 | 5 |
thyroid primordium | 2.94e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.46e-50 | 1 |
mucinous adenocarcinoma | 3.99e-50 | 1 |
mesenchymal cell neoplasm | 4.32e-26 | 2 |