FFCP PHASE1:Hg19::chr12:101603978..101603992,-: Difference between revisions
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|id=chr12:101603978..101603992,-
|short_description=p2@SLC5A8
|description=CAGE_peak_2_at_SLC5A8_5end
|association_with_transcript=23bp_to_NM_145913,uc001thz.3_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=160728 | |EntrezGene=160728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19119 | |HGNC=19119 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N695 | |UniProt=Q8N695 | ||
|association_with_transcript=23bp_to_NM_145913,uc001thz.3_5end | |||
|cluster_id=chr12:101603978..101603992,- | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_2_at_SLC5A8_5end | |||
|id=chr12:101603978..101603992,- | |||
|ontology_enrichment_celltype=CL:0000312!6.54e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.95e-17;5!UBERON:0003918;6.80e-09;10!UBERON:0007687;6.80e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.49e-24!115;UBERON:0003127!3.91e-10!2;UBERON:0000341!3.91e-10!2;UBERON:0005743!1.92e-08!86;UBERON:0002298!2.88e-08!8;UBERON:0000153!4.51e-08!129;UBERON:0007811!4.51e-08!129;UBERON:0001017!9.74e-08!82;UBERON:0004121!2.02e-07!169;UBERON:0000073!2.38e-07!94;UBERON:0001016!2.38e-07!94;UBERON:0000924!3.86e-07!173;UBERON:0006601!3.86e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.67e-40;2!UBERON:0002046;3.95e-17;5!UBERON:0000974;3.97e-14;6!UBERON:0003127;2.88e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.49e-40,2;UBERON:0002046,3.95e-17,5;UBERON:0004117,3.95e-17,5;UBERON:0007689,3.95e-17,5;UBERON:0007123,3.95e-17,5;UBERON:0003091,3.95e-17,5;UBERON:0003127,2.73e-11,2;UBERON:0000974,7.96e-09,10;UBERON:0009722,2.62e-08,11;UBERON:0007690,2.62e-08,11 | |||
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| ||
|short_description=p2@SLC5A8 | |||
}} | }} |
Latest revision as of 18:00, 15 September 2015
Short description: | p2@SLC5A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC5A8_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 23bp_to_NM_145913, uc001thz.3_5end |
EntrezGene: | SLC5A8 |
HGNC: | 19119 |
UniProt: | Q8N695 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.49e-40 | 2 |
thyroid gland | 3.95e-17 | 5 |
pharyngeal pouch | 3.95e-17 | 5 |
thyroid diverticulum | 3.95e-17 | 5 |
pharyngeal pouch 2 | 3.95e-17 | 5 |
thyroid primordium | 3.95e-17 | 5 |
open tracheal system trachea | 2.73e-11 | 2 |
neck | 7.96e-09 | 10 |
entire pharyngeal arch endoderm | 2.62e-08 | 11 |
early pharyngeal endoderm | 2.62e-08 | 11 |