FFCP PHASE1:Hg19::chr2:189869053..189869071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1281 | |EntrezGene=1281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2201 | |HGNC=2201 | ||
|TSSclassifier=strong | |||
|UniProt=P02461 | |UniProt=P02461 | ||
|association_with_transcript=46bp_to_X06700_5end | |association_with_transcript=46bp_to_X06700_5end | ||
|cluster_id=chr2:189869053..189869071,+ | |||
|coexpression_cluster_id=C292 | |||
|description=CAGE_peak_19_at_COL3A1_5end | |description=CAGE_peak_19_at_COL3A1_5end | ||
|id=chr2:189869053..189869071,+ | |id=chr2:189869053..189869071,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.05e-19!180;CL:0000057!5.60e-17!75;CL:0002334!4.02e-11!12;CL:0000048!1.50e-09!430;CL:0000183!2.21e-09!59;CL:0000187!2.81e-09!54;CL:0000723!5.59e-09!436;CL:0000680!2.37e-08!57;CL:0000056!2.37e-08!57;CL:0000355!2.37e-08!57;CL:0000034!2.97e-08!444;CL:0000499!8.96e-08!27;CL:0000393!1.57e-07!60;CL:0000211!1.57e-07!60;CL:0002569!8.27e-07!6 | |ontology_enrichment_celltype=CL:0000055!1.05e-19!180;CL:0000057!5.60e-17!75;CL:0002334!4.02e-11!12;CL:0000048!1.50e-09!430;CL:0000183!2.21e-09!59;CL:0000187!2.81e-09!54;CL:0000723!5.59e-09!436;CL:0000680!2.37e-08!57;CL:0000056!2.37e-08!57;CL:0000355!2.37e-08!57;CL:0000034!2.97e-08!444;CL:0000499!8.96e-08!27;CL:0000393!1.57e-07!60;CL:0000211!1.57e-07!60;CL:0002569!8.27e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.29e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!4.47e-09!61;UBERON:0002036!4.47e-09!61;UBERON:0003082!4.47e-09!61;UBERON:0002385!1.66e-08!63;UBERON:0001015!1.66e-08!63;UBERON:0000383!1.66e-08!63;UBERON:0004290!2.53e-08!70;UBERON:0000914!7.49e-08!83;UBERON:0002329!7.49e-08!83;UBERON:0003077!7.49e-08!83;UBERON:0003059!7.49e-08!83;UBERON:0007282!7.49e-08!83;UBERON:0009618!7.49e-08!83;UBERON:0007285!7.49e-08!83;UBERON:0003688!1.77e-07!6;UBERON:0002358!1.77e-07!6;UBERON:0003684!1.77e-07!6;UBERON:0001178!1.77e-07!6;UBERON:0002384!5.80e-07!375;UBERON:0000486!6.10e-07!82;UBERON:0003422!8.27e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.87e-08;6!UBERON:0002358;1.87e-08;6!UBERON:0003684;1.87e-08;6!UBERON:0001178;1.87e-08;6!UBERON:0004457;2.99e-08;9!UBERON:0000042;2.99e-08;9!UBERON:0005406;3.17e-07;2!UBERON:0001013;6.19e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.97e-08,6;UBERON:0002358,1.97e-08,6;UBERON:0003684,1.97e-08,6;UBERON:0001178,1.97e-08,6;UBERON:0005406,2.53e-07,2;UBERON:0001013,5.78e-07,14 | |||
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| ||
|short_description=p19@COL3A1 | |short_description=p19@COL3A1 | ||
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Latest revision as of 01:26, 19 September 2015
Short description: | p19@COL3A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_COL3A1_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | 46bp_to_X06700_5end |
EntrezGene: | COL3A1 |
HGNC: | 2201 |
UniProt: | P02461 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fat cell | 6.29e-07 | 15 |
Ontology term | p-value | n |
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omentum | 1.97e-08 | 6 |
peritoneum | 1.97e-08 | 6 |
abdominal cavity | 1.97e-08 | 6 |
visceral peritoneum | 1.97e-08 | 6 |
perirenal fat | 2.53e-07 | 2 |
adipose tissue | 5.78e-07 | 14 |