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FFCP PHASE1:Hg19::chr18:23713808..23713861,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=143471
|EntrezGene=143471
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=22985
|HGNC=22985
|TSSclassifier=strong
|UniProt=Q8TAA3
|UniProt=Q8TAA3
|association_with_transcript=0bp_to_ENST00000308268,ENST00000343848,ENST00000415576,NM_001025096,NM_001025097,NM_144662,uc002kvo.2,uc002kvp.2,uc002kvq.2,uc002kvr.2_5end
|association_with_transcript=0bp_to_ENST00000308268,ENST00000343848,ENST00000415576,NM_001025096,NM_001025097,NM_144662,uc002kvo.2,uc002kvp.2,uc002kvq.2,uc002kvr.2_5end
|cluster_id=chr18:23713808..23713861,+
|description=CAGE_peak_1_at_PSMA8_5end
|description=CAGE_peak_1_at_PSMA8_5end
|id=chr18:23713808..23713861,+
|id=chr18:23713808..23713861,+
|ontology_enrichment_celltype=CL:0000838!2.94e-21!52;CL:0000542!1.20e-20!53;CL:0000051!1.20e-20!53;CL:0000738!2.64e-18!140;CL:0000037!1.88e-17!172;CL:0000566!1.88e-17!172;CL:0000791!7.05e-16!18;CL:0000789!7.05e-16!18;CL:0002420!7.05e-16!18;CL:0002419!7.05e-16!18;CL:0000790!7.05e-16!18;CL:0000988!1.91e-15!182;CL:0002031!3.21e-15!124;CL:0002087!3.95e-14!119;CL:0000236!1.14e-13!14;CL:0002032!2.20e-13!165;CL:0000837!2.20e-13!165;CL:0000084!7.08e-12!25;CL:0000827!7.08e-12!25;CL:0000625!3.91e-10!11;CL:0000624!9.42e-09!6;CL:0000945!5.66e-08!24;CL:0000826!5.66e-08!24
|ontology_enrichment_celltype=CL:0000838!2.94e-21!52;CL:0000542!1.20e-20!53;CL:0000051!1.20e-20!53;CL:0000738!2.64e-18!140;CL:0000037!1.88e-17!172;CL:0000566!1.88e-17!172;CL:0000791!7.05e-16!18;CL:0000789!7.05e-16!18;CL:0002420!7.05e-16!18;CL:0002419!7.05e-16!18;CL:0000790!7.05e-16!18;CL:0000988!1.91e-15!182;CL:0002031!3.21e-15!124;CL:0002087!3.95e-14!119;CL:0000236!1.14e-13!14;CL:0002032!2.20e-13!165;CL:0000837!2.20e-13!165;CL:0000084!7.08e-12!25;CL:0000827!7.08e-12!25;CL:0000625!3.91e-10!11;CL:0000624!9.42e-09!6;CL:0000945!5.66e-08!24;CL:0000826!5.66e-08!24
|ontology_enrichment_celltype_v019=CL:0000791;1.94e-23;18!CL:0000789;1.94e-23;18!CL:0002419;1.94e-23;18!CL:0000236;2.11e-22;13!CL:0000084;1.25e-19;25!CL:0000542;5.63e-19;53!CL:0000624;1.93e-15;6!CL:0000945;2.67e-14;24!CL:0000625;3.09e-12;11
|ontology_enrichment_celltype_v019_2=CL:0000838,1.75e-33,52;CL:0000542,9.65e-33,53;CL:0000051,9.65e-33,53;CL:0000791,1.71e-23,18;CL:0000789,1.71e-23,18;CL:0002420,1.71e-23,18;CL:0002419,1.71e-23,18;CL:0000790,1.71e-23,18;CL:0000236,2.02e-20,14;CL:0000084,1.14e-19,25;CL:0000827,1.14e-19,25;CL:0000624,2.83e-15,6;CL:0000037,9.45e-15,168;CL:0002087,1.57e-14,115;CL:0000945,3.91e-14,24;CL:0000826,3.91e-14,24;CL:0000988,1.23e-13,177;CL:0002032,3.45e-13,161;CL:0000837,3.45e-13,161;CL:0000738,1.16e-12,136;CL:0000625,2.14e-12,11;CL:0002031,2.16e-12,120
|ontology_enrichment_development_v019=CL:0000790;1.94e-23;18!CL:0000051;5.63e-19;53
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!9.99e-07!7
|ontology_enrichment_uberon_v019=UBERON:0001905;1.89e-08;2!UBERON:0002757;1.89e-08;2!UBERON:0010134;1.89e-08;2!UBERON:0005408;1.89e-08;2!UBERON:0001899;1.89e-08;2
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.23e-08,2;UBERON:0002757,3.23e-08,2;UBERON:0010134,3.23e-08,2;UBERON:0005408,3.23e-08,2;UBERON:0001899,3.23e-08,2
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,39.5857394965341,0,0.587200878669695,0.553995408531877,0,1.08505435357926,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0,0.112328631146495,0,0,0,0,0.182664153764634,5.27988733383968,1.09227722252426,0.889509253863555,1.28019066769952,2.00197993518006,1.14950487990897,2.64417949113945,0.954053754535364,0.569212969109448,1.17447437874188,1.91136614062614,0,0.560508562981536,0,1.37696839079683,1.17903228824749,1.23360899399706,1.67186495390678,0.32592226663359,2.36723902867367,0,1.44833593950726,1.47302953737419,1.55073726208535,0.270803863765016,0.640456598628376,0.780356085359269,0.822189523018381,2.21080014228679,0.869409257205157,1.4828656316206,0.802622484269139,2.09071047609954,0.906474741580529,1.14966148080576,0.68725489096526,0.759059076058509,1.59282707162048,0,0.950452044448374,2.25862678616659,1.66382594500744,3.74792179657038,0.473554504088034,0.821127996921047,1.20964045934839,0,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,9.23402482258874,0,0,0,0.174129737299267,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9024169590255,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,10.2032814546446,0,0,0,0,0,0,0,0,0,0,0,11.0720021799485,0,0,0,0,0,10.5794346080192,6.15436994738562,4.59774653409171,0,0,0,0.146508179271894,0,0,0,0.47748896947538,1.48482340416319,1.84296421259539,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,2.55786185113436,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,1.094728735294,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.961905843018405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0,0,0,0,0,2.07353103920428,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,2.20263034055821,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,1.3451348888753,0,0,0,0,0,0.611727596791485,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,6.1532640379894,6.13536514265935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.751871343838829,0.45120521581504,0.999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,6.016980943017,20.4602485189246,31.8877314885852,0,0.103432995861895,0,0.476128862927481,0.452122368852043,0.682821857254437,0,0,0.202117188958219,0,0,0.606168477131288,0.215166616178029,0,0,0,0,0,0,0,0,0,0.603821380773079,0
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,39.5857394965341,0,0.587200878669695,0.553995408531877,0,1.08505435357926,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0,0.112328631146495,0,0,0,0,0.182664153764634,5.27988733383968,1.09227722252426,0.889509253863555,1.28019066769952,2.00197993518006,1.14950487990897,2.64417949113945,0.954053754535364,0.569212969109448,1.17447437874188,1.91136614062614,0,0.560508562981536,0,1.37696839079683,1.17903228824749,1.23360899399706,1.67186495390678,0.32592226663359,2.36723902867367,0,1.44833593950726,1.47302953737419,1.55073726208535,0.270803863765016,0.640456598628376,0.780356085359269,0.822189523018381,2.21080014228679,0.869409257205157,1.4828656316206,0.802622484269139,2.09071047609954,0.906474741580529,1.14966148080576,0.68725489096526,0.759059076058509,1.59282707162048,0,0.950452044448374,2.25862678616659,1.66382594500744,3.74792179657038,0.473554504088034,0.821127996921047,1.20964045934839,0,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,9.23402482258874,0,0,0,0.174129737299267,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9024169590255,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,10.2032814546446,0,0,0,0,0,0,0,0,0,0,0,11.0720021799485,0,0,0,0,0,10.5794346080192,6.15436994738562,4.59774653409171,0,0,0,0.146508179271894,0,0,0,0.47748896947538,1.48482340416319,1.84296421259539,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,2.55786185113436,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,1.094728735294,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.961905843018405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0,0,0,0,0,2.07353103920428,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,2.20263034055821,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,1.3451348888753,0,0,0,0,0,0.611727596791485,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,6.1532640379894,6.13536514265935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.751871343838829,0.45120521581504,0.999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,6.016980943017,20.4602485189246,31.8877314885852,0,0.103432995861895,0,0.476128862927481,0.452122368852043,0.682821857254437,0,0,0.202117188958219,0,0,0.606168477131288,0.215166616178029,0,0,0,0,0,0,0,0,0,0.603821380773079,0
|short_description=p1@PSMA8
|short_description=p1@PSMA8
}}
}}

Latest revision as of 01:51, 19 September 2015

Short description:p1@PSMA8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_PSMA8_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000308268, ENST00000343848, ENST00000415576, NM_001025096, NM_001025097, NM_144662, uc002kvo.2, uc002kvp.2, uc002kvq.2, uc002kvr.2_5end
EntrezGene:PSMA8
HGNC: 22985
UniProt: Q8TAA3
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data