FFCP PHASE1:Hg19::chr2:20552002..20552029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23369 | |EntrezGene=23369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14958 | |HGNC=14958 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z366 | |UniProt=F2Z366 | ||
|association_with_transcript=-7bp_to_ENST00000432105_5end | |association_with_transcript=-7bp_to_ENST00000432105_5end | ||
|cluster_id=chr2:20552002..20552029,- | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_7_at_PUM2_5end | |description=CAGE_peak_7_at_PUM2_5end | ||
|id=chr2:20552002..20552029,- | |id=chr2:20552002..20552029,- | ||
|ontology_enrichment_celltype=CL:0000047!6.00e-07!8 | |ontology_enrichment_celltype=CL:0000047!6.00e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.67e-11;25!CL:0000540;3.14e-08;6!CL:0000404;3.14e-08;6!CL:0002605;1.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.91e-11,25;CL:0000047,1.37e-10,8;CL:0000540,2.81e-08,6;CL:0000031,2.81e-08,6;CL:0000404,2.81e-08,6;CL:0002605,8.77e-08,3;CL:0000133,8.09e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.40e-08;3!CL:0000031;3.14e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!7.83e-08!22;DOID:2994!7.83e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.50e-18!94;UBERON:0001016!1.50e-18!94;UBERON:0005743!6.33e-16!86;UBERON:0001017!2.44e-13!82;UBERON:0001869!2.54e-13!32;UBERON:0000956!1.38e-12!25;UBERON:0000203!1.38e-12!25;UBERON:0001893!4.28e-12!34;UBERON:0002780!4.29e-12!41;UBERON:0001890!4.29e-12!41;UBERON:0006240!4.29e-12!41;UBERON:0002346!6.29e-12!90;UBERON:0002020!8.44e-12!34;UBERON:0003528!8.44e-12!34;UBERON:0003056!1.17e-11!61;UBERON:0003080!1.32e-11!42;UBERON:0002791!2.20e-11!33;UBERON:0000924!4.95e-11!173;UBERON:0006601!4.95e-11!173;UBERON:0003075!9.92e-11!86;UBERON:0007284!9.92e-11!86;UBERON:0004121!4.88e-10!169;UBERON:0002619!6.78e-10!22;UBERON:0000955!2.05e-09!69;UBERON:0006238!2.05e-09!69;UBERON:0001049!4.31e-09!57;UBERON:0005068!4.31e-09!57;UBERON:0006241!4.31e-09!57;UBERON:0007135!4.31e-09!57;UBERON:0001950!1.17e-08!20;UBERON:0002616!1.73e-08!59;UBERON:0007023!1.19e-07!115;UBERON:0000033!1.20e-07!123;UBERON:0000153!1.41e-07!129;UBERON:0007811!1.41e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.53e-12;2!UBERON:0002757;3.53e-12;2!UBERON:0010134;3.53e-12;2!UBERON:0005408;3.53e-12;2!UBERON:0001899;3.53e-12;2!UBERON:0000966;3.11e-10;5!UBERON:0005388;3.11e-10;5!UBERON:0001802;3.11e-10;5!UBERON:0002114;7.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.53e-12,2;UBERON:0002757,3.53e-12,2;UBERON:0010134,3.53e-12,2;UBERON:0005408,3.53e-12,2;UBERON:0001899,3.53e-12,2;UBERON:0001016,8.57e-10,89;UBERON:0000966,1.09e-08,6;UBERON:0005388,1.09e-08,6;UBERON:0001802,1.09e-08,6;UBERON:0001017,3.65e-08,81;UBERON:0002114,1.08e-07,2;UBERON:0011216,3.72e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,0.821246550437305,1.50651167513763,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.714397826272638,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.580969714347592,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,1.54657762555539,2.51274398001523,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,1.79515087581472,0.656029291399411,0.325378394664303,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0.540031437238115,0,0.961416640147258,0,0,0.557409525377156,0.144269212976445,0.142283686696828,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.63337622438398,0.19924798825107,0.552567831062295,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0.185536196323703,3.99227596002388,0,0,0,0,0,0,0.689486746482929,5.54048765428183,0.173624994933292,0,0.361789315876224,0,0,0,0.658156191461918,0,0,0,0,0.23056390438806,0.807818799687949,0,0,0,0,1.02193298195737,0,0,0,0.19606253431774,0,0,0,0,0,0.424059214301822,1.51472047819464,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0,0,0,1.82454789215666,0,1.45668227720456,0,0,0.91821828489147,0.189559738885464,0,0.207376382794494,0,0,0,1.19472429772959,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0.379864775735272,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0.458320848023367,0,0,0,0,1.07493555978762,0,1.16495949527454,0.0787831823072236,0.247247575143499,0.26961417541674,0.393709926058995,0.169346664131569,0.795229689809303,0.136203406111576,0.803765742325096,0.137539436597234,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,2.96417447846916,1.21792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.124192805882767,5.67229403238546,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0.530067437837643,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0.895260599125562,2.80344509631373,0.157265941855896,2.83945059299236,0.169732529954025,0,1.48722917110803,0,0,0,0.80057074828547,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,3.52900374710405,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,0,0.507326481551255,7.65764732625507,0,0,0.351742488719241,0,6.42842203053944,14.1239163331906,0,0,0,0.230467975111559,0,0,0.263091094251396,0,0,0,0.471346769748006,0.280272163313789,0,0,0,3.07349139959622,18.487592572729,0.581207126840626,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0.335566295393377,0,0,0,0.307988420568741,0,0,0,2.18845852677505,0,0,8.57536030614347,1.05673990496671,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.657887425858975,0.0644578879735772,1.19929387109915,0,0,0.0802413666891683,0,0,0,0.315543124386369,0.203974470572744,2.18175345170189,1.0580536810308,0,0,0,0.252332849670158,0.764859003745869,1.64708051314868,0.203977659483963,0.534434810531121,0.36757959813938,0,0.22733609465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| ||
|short_description=p7@PUM2 | |short_description=p7@PUM2 | ||
}} | }} |
Latest revision as of 16:43, 19 September 2015
Short description: | p7@PUM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PUM2_5end |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | -7bp_to_ENST00000432105_5end |
EntrezGene: | PUM2 |
HGNC: | 14958 |
UniProt: | F2Z366 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.91e-11 | 25 |
neuronal stem cell | 1.37e-10 | 8 |
neuron | 2.81e-08 | 6 |
neuroblast | 2.81e-08 | 6 |
electrically signaling cell | 2.81e-08 | 6 |
astrocyte of the cerebral cortex | 8.77e-08 | 3 |
neurectodermal cell | 8.09e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.53e-12 | 2 |
regional part of epithalamus | 3.53e-12 | 2 |
secretory circumventricular organ | 3.53e-12 | 2 |
circumventricular organ | 3.53e-12 | 2 |
epithalamus | 3.53e-12 | 2 |
nervous system | 8.57e-10 | 89 |
retina | 1.09e-08 | 6 |
photoreceptor array | 1.09e-08 | 6 |
posterior segment of eyeball | 1.09e-08 | 6 |
central nervous system | 3.65e-08 | 81 |
duodenum | 1.08e-07 | 2 |
organ system subdivision | 3.72e-07 | 223 |