FFCP PHASE1:Hg19::chr19:38743538..38743565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:38743538..38743565,+ | |||
|coexpression_cluster_id=C2486 | |||
|description=CAGE_peak_at_chr19:38743538..38743565,+ | |description=CAGE_peak_at_chr19:38743538..38743565,+ | ||
|id=chr19:38743538..38743565,+ | |id=chr19:38743538..38743565,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.11e-07!15 | |ontology_enrichment_celltype=CL:0000136!1.11e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.30e-18;13!CL:0002615;6.34e-13;3!CL:0002617;7.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.60e-16,15;CL:0002615,1.13e-12,3;CL:0002617,5.98e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.56e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-27!115;UBERON:0001049!2.42e-11!57;UBERON:0005068!2.42e-11!57;UBERON:0006241!2.42e-11!57;UBERON:0007135!2.42e-11!57;UBERON:0000073!5.52e-11!94;UBERON:0001016!5.52e-11!94;UBERON:0002616!2.02e-10!59;UBERON:0001017!2.44e-10!82;UBERON:0005743!8.72e-10!86;UBERON:0002020!2.84e-09!34;UBERON:0003528!2.84e-09!34;UBERON:0001893!4.41e-09!34;UBERON:0000955!8.41e-09!69;UBERON:0006238!8.41e-09!69;UBERON:0000475!1.32e-08!365;UBERON:0000464!1.47e-08!104;UBERON:0002791!1.52e-08!33;UBERON:0002780!2.07e-08!41;UBERON:0001890!2.07e-08!41;UBERON:0006240!2.07e-08!41;UBERON:0003080!4.86e-08!42;UBERON:0004121!5.10e-08!169;UBERON:0003075!6.73e-08!86;UBERON:0007284!6.73e-08!86;UBERON:0001869!1.06e-07!32;UBERON:0002553!1.24e-07!70;UBERON:0003886!1.85e-07!63;UBERON:0000924!1.89e-07!173;UBERON:0006601!1.89e-07!173;UBERON:0000466!2.34e-07!126;UBERON:0002346!4.57e-07!90;UBERON:0003688!6.26e-07!6;UBERON:0002358!6.26e-07!6;UBERON:0003684!6.26e-07!6;UBERON:0001178!6.26e-07!6;UBERON:0003135!9.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.64e-16;6!UBERON:0002358;2.64e-16;6!UBERON:0003684;2.64e-16;6!UBERON:0001178;2.64e-16;6!UBERON:0004457;9.08e-11;9!UBERON:0000042;9.08e-11;9!UBERON:0005162;5.60e-09;2!UBERON:0000122;5.60e-09;2!UBERON:0002148;1.98e-08;2!UBERON:0006331;1.98e-08;2!UBERON:0009662;1.98e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.82e-16,6;UBERON:0002358,6.82e-16,6;UBERON:0003684,6.82e-16,6;UBERON:0001178,6.82e-16,6;UBERON:0005162,4.02e-09,2;UBERON:0000122,4.02e-09,2;UBERON:0002148,1.07e-08,2;UBERON:0006331,1.07e-08,2;UBERON:0009662,1.07e-08,2;UBERON:0007023,8.21e-08,114;UBERON:0004457,8.49e-08,12;UBERON:0000042,8.49e-08,12 | |||
|phase1_expression=4.72363786103447,1.49870366723688,1.12763523276777,8.00586386825043,9.38618298297304,6.10636966870258,5.06599756336621,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.43917392846563,0.392937226493138,0,0,1.9472843619281,0.870648686496336,0.26591592103773,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.872188104285069,1.98788780678127,0.25326102332916,0,0,0,0,0,0.98667019366864,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.877955241761676,1.5324389789951,0.45071417671979,0.567160915800105,0.538168907066586,0.640672166455702,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0,0.504641701751257,0.72995471815166,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0.301586917234893,0,0,0,0,0,0.117408694235822,0.577465791044295,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0.256278298511402,1.02341449813341,1.44768529029247,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,1.56869953835371,0,0.316654886678627,1.13733384070897,0,0.431831832204279,0,0,1.50506932156456,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.949138274156178,0.762520775695299,0.511795582622668,0,0,0,0,0,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6227340708559,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,5.97743964753209,0.276283915531148,0,0,0,4.3545542272653,0,0,0,0.887790650732402,0,0,3.87733098438087,0.834912883456661,0,0,0,0,0,0,0,1.72371686620732,0,0,0.885741385813839,0,0,0,1.77328571372128,0.658156191461918,0,0,0.153900517007594,0,0,0,0.217294743844016,0,0,0,0,0.627921025580099,0.166211681900156,0.676786981851542,0.784250137270958,0.167821586975843,0.569261198172555,0,0,0.163232808159148,0,0,6.96683351754953,0.884575645033392,3.05515072466813,0,0,0,1.61762719153625,0.802577647298789,11.2446933948163,0,0,0,0.789168805698781,0,0,0,0,0,1.32930774541437,0.992975867626496,0.627865836814451,1.19472429772959,0.284609546029793,0,0.347119476670262,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,2.06244381610515,0,0.399358000997982,0.429226048136571,0.446342914883745,0.134366944973453,1.44119953416961,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,1.93924434542326,1.45455861916959,0.342173675768659,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0.544017803369474,1.2534494701135,0.306345576763462,0.983617892129413,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.887432412294818,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0.436838552768056,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.345786262321089,0.645902582527404,8.56616521554926,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,0.413373593002368,1.20490039368423,0.546974809018219,0.548257766857182,2.48105589194647,0,0,0,0,0,0,0.266107110487916,0,0,0.475788130837822,0.855046056317038,0.118193840883968,0,0.156986185701028,0.471346769748006,0.280272163313789,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.397901550322736,0.356760272332706,0,0.219881033490858,0,0,0.655678681511872,0,3.67722482630858,0,1.96308467114945,0,2.113278637917,0.509781344063451,0.187967835959707,0.19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|phase1_expression=4.72363786103447,1.49870366723688,1.12763523276777,8.00586386825043,9.38618298297304,6.10636966870258,5.06599756336621,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.43917392846563,0.392937226493138,0,0,1.9472843619281,0.870648686496336,0.26591592103773,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.872188104285069,1.98788780678127,0.25326102332916,0,0,0,0,0,0.98667019366864,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.877955241761676,1.5324389789951,0.45071417671979,0.567160915800105,0.538168907066586,0.640672166455702,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0,0.504641701751257,0.72995471815166,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0.301586917234893,0,0,0,0,0,0.117408694235822,0.577465791044295,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0.256278298511402,1.02341449813341,1.44768529029247,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,1.56869953835371,0,0.316654886678627,1.13733384070897,0,0.431831832204279,0,0,1.50506932156456,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.949138274156178,0.762520775695299,0.511795582622668,0,0,0,0,0,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6227340708559,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,5.97743964753209,0.276283915531148,0,0,0,4.3545542272653,0,0,0,0.887790650732402,0,0,3.87733098438087,0.834912883456661,0,0,0,0,0,0,0,1.72371686620732,0,0,0.885741385813839,0,0,0,1.77328571372128,0.658156191461918,0,0,0.153900517007594,0,0,0,0.217294743844016,0,0,0,0,0.627921025580099,0.166211681900156,0.676786981851542,0.784250137270958,0.167821586975843,0.569261198172555,0,0,0.163232808159148,0,0,6.96683351754953,0.884575645033392,3.05515072466813,0,0,0,1.61762719153625,0.802577647298789,11.2446933948163,0,0,0,0.789168805698781,0,0,0,0,0,1.32930774541437,0.992975867626496,0.627865836814451,1.19472429772959,0.284609546029793,0,0.347119476670262,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,2.06244381610515,0,0.399358000997982,0.429226048136571,0.446342914883745,0.134366944973453,1.44119953416961,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,1.93924434542326,1.45455861916959,0.342173675768659,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0.544017803369474,1.2534494701135,0.306345576763462,0.983617892129413,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.887432412294818,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0.436838552768056,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.345786262321089,0.645902582527404,8.56616521554926,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,0.413373593002368,1.20490039368423,0.546974809018219,0.548257766857182,2.48105589194647,0,0,0,0,0,0,0.266107110487916,0,0,0.475788130837822,0.855046056317038,0.118193840883968,0,0.156986185701028,0.471346769748006,0.280272163313789,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.397901550322736,0.356760272332706,0,0.219881033490858,0,0,0.655678681511872,0,3.67722482630858,0,1.96308467114945,0,2.113278637917,0.509781344063451,0.187967835959707,0.19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| ||
|short_description=p@chr19:38743538..38743565,+ | |short_description=p@chr19:38743538..38743565,+ | ||
}} | }} |
Latest revision as of 07:17, 26 July 2015
Short description: | p@chr19:38743538..38743565, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:38743538..38743565, + |
Coexpression cluster: | C2486_optic_Adipocyte_aorta_embryonic_diencephalon_basal_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.60e-16 | 15 |
adipocyte of omentum tissue | 1.13e-12 | 3 |
adipocyte of breast | 5.98e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.82e-16 | 6 |
peritoneum | 6.82e-16 | 6 |
abdominal cavity | 6.82e-16 | 6 |
visceral peritoneum | 6.82e-16 | 6 |
multi cell component structure | 4.02e-09 | 2 |
neuron projection bundle | 4.02e-09 | 2 |
locus ceruleus | 1.07e-08 | 2 |
brainstem nucleus | 1.07e-08 | 2 |
hindbrain nucleus | 1.07e-08 | 2 |
adult organism | 8.21e-08 | 114 |
cavity lining | 8.49e-08 | 12 |
serous membrane | 8.49e-08 | 12 |