FFCP PHASE1:Hg19::chr12:12654246..12654268,-: Difference between revisions
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|id=chr12:12654246..12654268,-
|short_description=p@chr12:12654246..12654268,-
|description=CAGE_peak_at_chr12:12654246..12654268,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:12654246..12654268,- | |||
|coexpression_cluster_id=C343 | |||
|description=CAGE_peak_at_chr12:12654246..12654268,- | |||
|id=chr12:12654246..12654268,- | |||
|ontology_enrichment_celltype=CL:0000624!3.86e-31!6;CL:0000791!8.57e-22!18;CL:0000789!8.57e-22!18;CL:0002420!8.57e-22!18;CL:0002419!8.57e-22!18;CL:0000790!8.57e-22!18;CL:0000898!1.04e-16!3;CL:0000084!3.01e-15!25;CL:0000827!3.01e-15!25;CL:0000815!8.17e-12!2;CL:0000792!8.17e-12!2;CL:0002677!8.17e-12!2;CL:0000080!4.40e-08!6;CL:0000838!4.79e-08!52;CL:0000542!7.34e-08!53;CL:0000051!7.34e-08!53;CL:0000842!8.06e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000815;8.20e-37;2!CL:0000792;8.20e-37;2!CL:0002677;8.20e-37;2!CL:0000624;1.76e-27;6!CL:0000898;6.21e-25;3!CL:0000791;1.28e-09;18!CL:0000789;1.28e-09;18!CL:0002419;1.28e-09;18!CL:0000226;2.97e-07;3!CL:0000842;2.97e-07;3!CL:0000084;4.41e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,6.83e-37,2;CL:0000792,6.83e-37,2;CL:0002677,6.83e-37,2;CL:0000624,1.34e-27,6;CL:0000898,5.50e-25,3;CL:0000791,1.17e-09,18;CL:0000789,1.17e-09,18;CL:0002420,1.17e-09,18;CL:0002419,1.17e-09,18;CL:0000790,1.17e-09,18;CL:0000226,2.97e-07,3;CL:0000842,2.97e-07,3;CL:0000084,4.14e-07,25;CL:0000827,4.14e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.28e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!3.87e-12!10;UBERON:0009145!3.87e-12!10;UBERON:0002370!1.48e-11!4;UBERON:0005058!1.48e-11!4;UBERON:0009113!1.48e-11!4;UBERON:0003295!1.48e-11!4;UBERON:0005562!1.48e-11!4;UBERON:0004177!2.61e-11!7;UBERON:0006562!5.15e-11!11;UBERON:0000178!2.80e-08!15;UBERON:0000179!2.80e-08!15;UBERON:0000463!2.80e-08!15;UBERON:0003351!7.33e-08!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:12654246..12654268,- | |||
}} | }} |
Latest revision as of 06:33, 24 July 2015
Short description: | p@chr12:12654246..12654268, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12654246..12654268, - |
Coexpression cluster: | C343_CD4_mycosis_kidney_signet_hairy_b_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 6.83e-37 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.83e-37 | 2 |
naive regulatory T cell | 6.83e-37 | 2 |
CD4-positive, alpha-beta T cell | 1.34e-27 | 6 |
naive T cell | 5.50e-25 | 3 |
mature alpha-beta T cell | 1.17e-09 | 18 |
alpha-beta T cell | 1.17e-09 | 18 |
immature T cell | 1.17e-09 | 18 |
mature T cell | 1.17e-09 | 18 |
immature alpha-beta T cell | 1.17e-09 | 18 |
single nucleate cell | 2.97e-07 | 3 |
mononuclear cell | 2.97e-07 | 3 |
T cell | 4.14e-07 | 25 |
pro-T cell | 4.14e-07 | 25 |