FFCP PHASE1:Hg19::chr19:41509967..41509988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1555 | |EntrezGene=1555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2615 | |HGNC=2615 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWP3 | |UniProt=B4DWP3 | ||
|association_with_transcript=116bp_to_AK301620_5end | |association_with_transcript=116bp_to_AK301620_5end | ||
|cluster_id=chr19:41509967..41509988,+ | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_3_at_CYP2B6_5end | |description=CAGE_peak_3_at_CYP2B6_5end | ||
|id=chr19:41509967..41509988,+ | |id=chr19:41509967..41509988,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.71e-10!5;CL:0000223!2.67e-09!59;CL:0000540!9.63e-09!6;CL:0000031!9.63e-09!6;CL:0000404!9.63e-09!6;CL:0000047!9.11e-07!8 | |ontology_enrichment_celltype=CL:0002322!2.71e-10!5;CL:0000223!2.67e-09!59;CL:0000540!9.63e-09!6;CL:0000031!9.63e-09!6;CL:0000404!9.63e-09!6;CL:0000047!9.11e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3!CL:0000182;1.51e-17;12!CL:0002149;1.32e-09;6!CL:0002255;1.32e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.46e-18,3;CL:0000182,1.57e-17,12;CL:0000223,1.72e-14,58;CL:0002149,1.32e-09,6;CL:0002255,1.32e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000223;6.40e-10;58 | |||
|ontology_enrichment_disease=DOID:299!6.87e-08!25;DOID:4929!2.74e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.32e-09;6!DOID:299;5.60e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.32e-09,6;DOID:299,5.49e-09,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-11;19!UBERON:0006925;1.68e-11;19!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0002423;5.38e-09;25!UBERON:0002365;1.15e-07;31!UBERON:0002330;1.15e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-11,19;UBERON:0006925,1.72e-11,19;UBERON:0008836,1.72e-11,19;UBERON:0008835,4.53e-10,22;UBERON:0003894,4.53e-10,22;UBERON:0009854,1.12e-09,23;UBERON:0007499,5.49e-09,25;UBERON:0009497,5.49e-09,25;UBERON:0000015,5.49e-09,25;UBERON:0002423,5.49e-09,25;UBERON:0006235,5.49e-09,25;UBERON:0004161,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31 | |||
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|short_description=p3@CYP2B6 | |short_description=p3@CYP2B6 | ||
}} | }} |
Latest revision as of 03:24, 18 September 2015
Short description: | p3@CYP2B6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP2B6_5end |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | 116bp_to_AK301620_5end |
EntrezGene: | CYP2B6 |
HGNC: | 2615 |
UniProt: | B4DWP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.46e-18 | 3 |
hepatocyte | 1.57e-17 | 12 |
endodermal cell | 1.72e-14 | 58 |
epithelial cell of uterus | 1.32e-09 | 6 |
stromal cell of endometrium | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-11 | 19 |
digestive gland | 1.72e-11 | 19 |
liver bud | 1.72e-11 | 19 |
hepatic diverticulum | 4.53e-10 | 22 |
liver primordium | 4.53e-10 | 22 |
digestive tract diverticulum | 1.12e-09 | 23 |
epithelial sac | 5.49e-09 | 25 |
epithelium of foregut-midgut junction | 5.49e-09 | 25 |
anatomical boundary | 5.49e-09 | 25 |
hepatobiliary system | 5.49e-09 | 25 |
foregut-midgut junction | 5.49e-09 | 25 |
septum transversum | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
exocrine gland | 1.92e-07 | 31 |
exocrine system | 1.92e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.32e-09 | 6 |
adenocarcinoma | 5.49e-09 | 25 |