FFCP PHASE1:Hg19::chr3:119500874..119500885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8856 | |EntrezGene=8856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7968 | |HGNC=7968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474090_5end | |association_with_transcript=0bp_to_ENST00000474090_5end | ||
|cluster_id=chr3:119500874..119500885,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_5_at_NR1I2_5end | |description=CAGE_peak_5_at_NR1I2_5end | ||
|id=chr3:119500874..119500885,+ | |id=chr3:119500874..119500885,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.74e-24!12;CL:0000417!2.74e-24!12;CL:0000668!2.74e-24!12;CL:0000414!2.74e-24!12;CL:0000412!2.74e-24!12;CL:0000182!2.74e-24!12 | |ontology_enrichment_celltype=CL:0000181!2.74e-24!12;CL:0000417!2.74e-24!12;CL:0000668!2.74e-24!12;CL:0000414!2.74e-24!12;CL:0000412!2.74e-24!12;CL:0000182!2.74e-24!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.34e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!5.28e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.85e-22!19;UBERON:0006925!6.85e-22!19;UBERON:0008836!6.85e-22!19;UBERON:0008835!7.17e-19!22;UBERON:0003894!7.17e-19!22;UBERON:0009854!4.88e-18!23;UBERON:0007499!1.42e-16!25;UBERON:0009497!1.42e-16!25;UBERON:0000015!1.42e-16!25;UBERON:0002423!1.42e-16!25;UBERON:0006235!1.42e-16!25;UBERON:0004161!1.42e-16!25;UBERON:0005057!6.35e-16!26;UBERON:0009856!6.35e-16!26;UBERON:0002365!2.64e-13!31;UBERON:0002330!2.64e-13!31;UBERON:0002368!9.55e-12!35;UBERON:0000160!1.70e-10!27;UBERON:0004921!1.69e-09!129;UBERON:0004185!1.69e-09!129;UBERON:0000949!4.69e-09!45;UBERON:0005409!3.85e-08!35;UBERON:0002108!1.14e-07!14;UBERON:0001007!1.16e-07!155;UBERON:0001555!1.16e-07!155;UBERON:0007026!1.16e-07!155;UBERON:0003929!1.76e-07!54;UBERON:0005172!2.45e-07!55;UBERON:0005173!2.45e-07!55;UBERON:0004119!6.63e-07!169;UBERON:0000925!6.63e-07!169;UBERON:0006595!6.63e-07!169;UBERON:0002530!8.21e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.63e-14;19!UBERON:0006925;4.63e-14;19!UBERON:0002423;7.29e-11;25!UBERON:0002365;3.61e-09;31!UBERON:0002330;3.61e-09;31!UBERON:0000160;3.00e-07;17!UBERON:0001007;3.34e-07;81!UBERON:0002368;4.24e-07;33!UBERON:0002108;5.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.53e-14,19;UBERON:0006925,4.53e-14,19;UBERON:0008836,4.53e-14,19;UBERON:0008835,2.96e-12,22;UBERON:0003894,2.96e-12,22;UBERON:0009854,9.39e-12,23;UBERON:0007499,7.16e-11,25;UBERON:0009497,7.16e-11,25;UBERON:0000015,7.16e-11,25;UBERON:0002423,7.16e-11,25;UBERON:0006235,7.16e-11,25;UBERON:0004161,7.16e-11,25;UBERON:0009856,1.76e-10,26;UBERON:0002365,6.70e-09,31;UBERON:0002330,6.70e-09,31;UBERON:0002368,5.87e-08,35;UBERON:0000160,3.04e-07,17;UBERON:0002108,5.38e-07,4 | |||
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|short_description=p5@NR1I2 | |short_description=p5@NR1I2 | ||
}} | }} |
Latest revision as of 21:15, 19 September 2015
Short description: | p5@NR1I2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR1I2_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000474090_5end |
EntrezGene: | NR1I2 |
HGNC: | 7968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.24e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.53e-14 | 19 |
digestive gland | 4.53e-14 | 19 |
liver bud | 4.53e-14 | 19 |
hepatic diverticulum | 2.96e-12 | 22 |
liver primordium | 2.96e-12 | 22 |
digestive tract diverticulum | 9.39e-12 | 23 |
epithelial sac | 7.16e-11 | 25 |
epithelium of foregut-midgut junction | 7.16e-11 | 25 |
anatomical boundary | 7.16e-11 | 25 |
hepatobiliary system | 7.16e-11 | 25 |
foregut-midgut junction | 7.16e-11 | 25 |
septum transversum | 7.16e-11 | 25 |
sac | 1.76e-10 | 26 |
exocrine gland | 6.70e-09 | 31 |
exocrine system | 6.70e-09 | 31 |
endocrine gland | 5.87e-08 | 35 |
intestine | 3.04e-07 | 17 |
small intestine | 5.38e-07 | 4 |