FFCP PHASE1:Hg19::chr3:187930491..187930511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |EntrezGene=4026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |HGNC=6679 | ||
|TSSclassifier=strong | |||
|UniProt=C9JE51 | |UniProt=C9JE51 | ||
|association_with_transcript=0bp_to_ENST00000443217_5end | |association_with_transcript=0bp_to_ENST00000443217_5end | ||
|cluster_id=chr3:187930491..187930511,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_2_at_LPP_5end | |description=CAGE_peak_2_at_LPP_5end | ||
|id=chr3:187930491..187930511,+ | |id=chr3:187930491..187930511,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.32e-09!180;CL:0000393!3.09e-07!60;CL:0000211!3.09e-07!60;CL:0000057!5.66e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.32e-09!180;CL:0000393!3.09e-07!60;CL:0000211!3.09e-07!60;CL:0000057!5.66e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-23!115;UBERON:0000475!3.72e-19!365;UBERON:0000481!1.63e-17!347;UBERON:0000468!2.65e-16!659;UBERON:0005256!4.98e-13!143;UBERON:0000119!1.08e-12!312;UBERON:0000483!1.31e-12!309;UBERON:0000467!2.29e-12!625;UBERON:0000480!3.37e-12!626;UBERON:0000477!3.77e-12!286;UBERON:0000062!7.29e-12!511;UBERON:0002100!2.75e-10!216;UBERON:0004111!3.50e-10!241;UBERON:0003104!1.40e-09!238;UBERON:0009142!1.40e-09!238;UBERON:0000025!2.04e-09!194;UBERON:0003103!2.40e-09!69;UBERON:0000922!7.50e-09!612;UBERON:0003075!6.00e-08!86;UBERON:0007284!6.00e-08!86;UBERON:0004876!9.35e-08!20;UBERON:0002385!1.14e-07!63;UBERON:0001015!1.14e-07!63;UBERON:0000383!1.14e-07!63;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605;UBERON:0002417!1.86e-07!61;UBERON:0000916!1.86e-07!61;UBERON:0003887!2.41e-07!21;UBERON:0001017!2.61e-07!82;UBERON:0000923!3.15e-07!604;UBERON:0005291!3.15e-07!604;UBERON:0006598!3.15e-07!604;UBERON:0002532!3.15e-07!604;UBERON:0005743!3.57e-07!86;UBERON:0000080!6.96e-07!18;UBERON:0002120!6.96e-07!18;UBERON:0004875!6.96e-07!18;UBERON:0005721!6.96e-07!18;UBERON:0005754!6.96e-07!18;UBERON:0007297!6.96e-07!18;UBERON:0002346!7.50e-07!90;UBERON:0005172!8.82e-07!55;UBERON:0005173!8.82e-07!55;UBERON:0000064!9.15e-07!219;UBERON:0001134!9.49e-07!61;UBERON:0002036!9.49e-07!61;UBERON:0003082!9.49e-07!61;UBERON:0004290!9.99e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.31e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.35e-18,114;UBERON:0003104,1.73e-11,160;UBERON:0009142,1.73e-11,160;UBERON:0003103,6.65e-10,68;UBERON:0002100,1.43e-08,199;UBERON:0005256,3.51e-08,122;UBERON:0000160,5.96e-08,17;UBERON:0000922,1.26e-07,592;UBERON:0000489,1.27e-07,31;UBERON:0005409,4.00e-07,25;UBERON:0005423,4.35e-07,581;UBERON:0000483,5.11e-07,306;UBERON:0000119,6.25e-07,309;UBERON:0006555,8.63e-07,16;UBERON:0004819,8.63e-07,16 | |||
|phase1_expression=1.09007027562334,1.92690471501885,1.69145284915165,4.00293193412522,0.446961094427288,1.74467704820074,7.59899634504932,1.89515962028049,0,5.6518805395347,7.6758128476967,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,2.58554221961255,1.22400414746552,1.56727360739044,24.6162948932709,30.1123735160345,35.7796522845188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.2786256184353,0,0.50133791063589,0,0,0,12.1004565970007,7.09534071880205,6.58760892698445,30.7145932042136,0,0,1.9472843619281,2.43781632218974,2.52620124985844,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9273268406876,7.21793916488105,4.237093786023,1.14734648299525,0,0,4.2699598291882,1.72667283892012,1.55605517699883,0.942974704487816,0.817309515567294,0.454072282934794,0.576175924479999,1.87457145467037,1.24864030732128,0,0,0.704606991862589,20.0722451016483,16.2922935774608,0,0.368502951935304,0,0,1.7308685049499,3.64064544775211,5.74894513452991,0.168336113954066,1.50142223846357,0.277064115484183,1.75591048352335,2.45190236639216,1.80285670687916,0.680593098960126,15.7862879406199,4.27114777637135,4.23863802319124,2.70081986475962,0.618315175430633,6.69865404118636,3.90845398296339,4.72573730275545,5.06672426838233,15.9033277773792,6.62759270224555,0.484938170456436,17.0404604407975,6.85114267947954,6.27374191548804,0,0.272746120590835,0,2.5614478287215,1.59035721985782,0.813357600086629,2.48786532036889,3.02785021050754,0.72995471815166,0,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,11.2193419042757,2.8810180793198,0,0,0,0,0,1.59884970106048,1.54411029268673,0,0,0,0,0.977424915930974,0,4.3299402607582,2.78232971940184,6.22266079449855,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0.784917590417525,0,1.3200891447771,0.387815147273333,3.57656445851882,3.381211010224,19.6794206272804,12.4808924293639,0.257207374262142,0,0.532844358032199,1.57275793023962,0,1.64648067356154,4.56030658011229,1.77695974371273,0.791951872933429,0,0,0,0,0,0,0.958499421966331,6.89171615004683,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0.773288812777695,3.18280904135263,1.27587750330633,0,0,0,0,0.500170521059677,0,2.49565033836969,0,0,0,0.300946099727719,0,0,0,0.921845842708516,0,0.587403472388222,0,0,0,0,0,0,0,0.496215615637554,4.45039722535381,1.12264037773229,0.512556597022804,0.511707249066704,0.321707842287215,1.48418066444991,1.07946785661859,0.355123450626254,0.739144404124282,0,0.464841513839837,1.45031339509947,0,0,0.34444334449382,0,0.524497659837696,4.06079651616671,4.92898157468254,24.3148428444825,20.4594914514565,8.44413031143006,1.13733384070897,0,7.34114114747274,0,3.79325012561394,6.02027728625824,7.90116446439619,0.831076008928724,20.148727924996,0,0,0,0.656029291399411,0,17.826095015056,0,0,2.87132768998086,0,1.6068392984416,0.386682873168488,1.07834031980251,1.38153307253517,4.9621166094431,2.68550612170684,1.88521702088497,2.30111894023472,0.267096106940212,0,0,0,0,0.464845549297286,1.5740617341532,0,0,1.59691809095107,0,4.07713282028624,4.8662461492277,1.116475108079,14.8698329617801,23.6381440465543,0.767693373934002,0.855877976067841,0,0.78494864019923,12.0514546580821,4.39259247577688,4.00562167975334,1.2130948894399,3.17020642346017,0,4.38870365180631,0.487426979262569,2.11300293513511,1.36499911407986,0.282810863907425,0,0,0.66343897524122,5.26141062304515,0,1.9676842561399,18.4648443036061,21.3778213688828,7.60578126837052,1.29070216983646,0.785992328104969,15.3368552136938,4.61189383291777,0,0.329294892959902,0.379473173765715,1.74967360122491,0,0,0,16.8517403390435,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.0939107563798,0,0,0,0,0,0,0,0.281338832821026,0,0,0,338.522332038567,120.736071087112,0,30.6806047506464,0,1.55519793830904,0.0898683511473268,1.07412704805365,0,492.427880939573,0,67.7935639882285,0,1.94813006139888,1.99613798001194,0,0,38.4249774980441,0,0,0,0,0,0.173624994933292,1.77148277162768,0.482385754501632,0,0.221158519862449,0.886642856860642,10.0917282690827,0,0,129.045583510868,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,24.639752625101,0,0,0,0,0,0,0,0,0,0,5.87638109372932,2.26164914294305,0,151.279813523933,103.406892904403,153.979596523274,0,0,0,2.02203398942031,2.40773294189637,0.234264445725339,0,0,0,40.6421934934872,45.9764720984923,0,53.5190329453293,0,0,0,0,0,0,0.284609546029793,0,0,0,0,36.6926003308263,0,0,0,0,299.502082916239,0,13.1068829652709,0,0,1.13959432720582,0,2.32460578729448,150.484361291244,0,0,0,0,0,0,0,0,0,0,0.577901179803038,1.80126086612937,1.09524303113594,0,5.15718529703949,0,10.8920136496179,131.308922958695,22.971936786458,4.3929380109778,4.72148652950228,13.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| ||
|short_description=p2@LPP | |short_description=p2@LPP | ||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p2@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPP_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000443217_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9JE51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.35e-18 | 114 |
mesenchyme | 1.73e-11 | 160 |
entire embryonic mesenchyme | 1.73e-11 | 160 |
compound organ | 6.65e-10 | 68 |
trunk | 1.43e-08 | 199 |
trunk mesenchyme | 3.51e-08 | 122 |
intestine | 5.96e-08 | 17 |
embryo | 1.26e-07 | 592 |
cavitated compound organ | 1.27e-07 | 31 |
gastrointestinal system | 4.00e-07 | 25 |
developing anatomical structure | 4.35e-07 | 581 |
epithelium | 5.11e-07 | 306 |
cell layer | 6.25e-07 | 309 |
excretory tube | 8.63e-07 | 16 |
kidney epithelium | 8.63e-07 | 16 |