FFCP PHASE1:Hg19::chr19:56028873..56028888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56028873..56028888,+ | |||
|coexpression_cluster_id=C1063 | |||
|description=CAGE_peak_at_chr19:56028873..56028888,+ | |description=CAGE_peak_at_chr19:56028873..56028888,+ | ||
|id=chr19:56028873..56028888,+ | |id=chr19:56028873..56028888,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.51e-11!75;CL:0002620!1.32e-08!23;CL:0000055!4.64e-08!180;CL:0000153!2.70e-07!9;CL:0000447!2.70e-07!9;CL:0000327!3.12e-07!14;CL:0000667!9.23e-07!6;CL:0000058!9.23e-07!6;CL:0000138!9.23e-07!6 | |ontology_enrichment_celltype=CL:0000057!2.51e-11!75;CL:0002620!1.32e-08!23;CL:0000055!4.64e-08!180;CL:0000153!2.70e-07!9;CL:0000447!2.70e-07!9;CL:0000327!3.12e-07!14;CL:0000667!9.23e-07!6;CL:0000058!9.23e-07!6;CL:0000138!9.23e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.98e-13;6!CL:0002570;1.94e-09;8!CL:0000153;9.10e-09;9!CL:0000447;9.10e-09;9!CL:0000135;2.59e-07;3!CL:0000388;2.59e-07;3!CL:0002620;8.78e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.08e-13,6;CL:0000138,4.08e-13,6;CL:0002570,3.01e-09,8;CL:0000153,9.23e-09,9;CL:0000447,9.23e-09,9;CL:0000135,1.78e-07,3;CL:0000388,1.78e-07,3;CL:0002620,7.36e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.15e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.17e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.99e-11;14!UBERON:0007846;2.59e-07;3!UBERON:0000043;2.59e-07;3!UBERON:0007845;2.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.60e-11,14;UBERON:0007846,1.78e-07,3;UBERON:0000043,1.78e-07,3;UBERON:0007845,1.78e-07,3 | |||
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| ||
|short_description=p@chr19:56028873..56028888,+ | |short_description=p@chr19:56028873..56028888,+ | ||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56028873..56028888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56028873..56028888, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.08e-13 | 6 |
chondrocyte | 4.08e-13 | 6 |
mesenchymal stem cell of adipose | 3.01e-09 | 8 |
GAG secreting cell | 9.23e-09 | 9 |
carbohydrate secreting cell | 9.23e-09 | 9 |
fibrocyte | 1.78e-07 | 3 |
tendon cell | 1.78e-07 | 3 |
skin fibroblast | 7.36e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.60e-11 | 14 |
dense regular connective tissue | 1.78e-07 | 3 |
tendon | 1.78e-07 | 3 |
regular connective tissue | 1.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.17e-08 | 14 |