FFCP PHASE1:Hg19::chr12:4714145..4714156,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:4714145..4714156,+
|short_description=p2@DYRK4
|description=CAGE_peak_2_at_DYRK4_5end
|association_with_transcript=0bp_to_ENST00000545342_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8798 | |EntrezGene=8798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3095 | |HGNC=3095 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQW1 | |UniProt=B4DQW1 | ||
|association_with_transcript=0bp_to_ENST00000545342_5end | |||
|cluster_id=chr12:4714145..4714156,+ | |||
|description=CAGE_peak_2_at_DYRK4_5end | |||
|id=chr12:4714145..4714156,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.01e-10!180;CL:0000183!1.52e-09!59;CL:0000680!1.58e-09!57;CL:0000056!1.58e-09!57;CL:0000355!1.58e-09!57;CL:0000187!7.37e-09!54;CL:0000220!8.14e-09!246;CL:0002321!1.74e-08!248;CL:0000192!2.78e-08!42;CL:0000514!2.78e-08!42;CL:0000222!3.94e-08!119;CL:0000548!4.12e-08!679;CL:0000004!4.12e-08!679;CL:0000255!4.12e-08!679;CL:0000359!1.13e-07!32;CL:0000144!1.43e-07!625;CL:0000012!1.44e-07!682;CL:0000057!1.48e-07!75;CL:0000393!3.00e-07!60;CL:0000211!3.00e-07!60;CL:0002371!8.80e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.73e-10;32!CL:0000192;2.59e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.51e-11,32;CL:0000680,3.59e-10,58;CL:0000056,3.59e-10,58;CL:0000355,3.59e-10,58;CL:0000192,3.65e-10,43;CL:0000514,3.65e-10,43;CL:0002321,2.42e-09,250;CL:0000187,2.90e-09,55;CL:0000222,6.93e-09,121;CL:0000393,2.46e-07,61;CL:0000211,2.46e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.59e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.30e-09!83;UBERON:0002329!8.30e-09!83;UBERON:0003077!8.30e-09!83;UBERON:0003059!8.30e-09!83;UBERON:0007282!8.30e-09!83;UBERON:0009618!8.30e-09!83;UBERON:0007285!8.30e-09!83;UBERON:0000486!1.75e-08!82;UBERON:0001134!2.23e-08!61;UBERON:0002036!2.23e-08!61;UBERON:0003082!2.23e-08!61;UBERON:0004290!2.38e-08!70;UBERON:0002049!4.69e-08!79;UBERON:0007798!4.69e-08!79;UBERON:0002385!6.73e-08!63;UBERON:0001015!6.73e-08!63;UBERON:0000383!6.73e-08!63;UBERON:0004872!7.38e-08!84;UBERON:0001637!4.15e-07!42;UBERON:0003509!4.15e-07!42;UBERON:0004572!4.15e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.19e-10,83;UBERON:0002049,1.41e-10,78;UBERON:0007798,1.41e-10,78;UBERON:0001637,9.27e-10,42;UBERON:0003509,9.27e-10,42;UBERON:0004572,9.27e-10,42;UBERON:0000486,4.23e-09,83;UBERON:0007500,4.76e-09,59;UBERON:0001981,4.76e-09,59;UBERON:0004537,4.76e-09,59;UBERON:0006965,4.76e-09,59;UBERON:0004535,6.93e-09,109;UBERON:0001134,8.98e-09,62;UBERON:0002036,8.98e-09,62;UBERON:0003082,8.98e-09,62;UBERON:0000055,1.71e-08,68;UBERON:0001009,3.12e-08,112;UBERON:0002385,3.74e-08,64;UBERON:0001015,3.74e-08,64;UBERON:0000383,3.74e-08,64;UBERON:0002329,3.75e-08,71;UBERON:0003059,3.75e-08,71;UBERON:0007282,3.75e-08,71;UBERON:0004290,3.75e-08,71;UBERON:0009618,3.75e-08,71;UBERON:0003077,7.03e-08,72;UBERON:0007285,7.03e-08,72;UBERON:0007524,1.29e-07,73;UBERON:0007503,1.31e-07,78;UBERON:0004573,1.87e-07,33;UBERON:0004571,1.87e-07,33 | |||
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| ||
|short_description=p2@DYRK4 | |||
}} | }} |
Latest revision as of 11:51, 18 September 2015
Short description: | p2@DYRK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DYRK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545342_5end |
EntrezGene: | DYRK4 |
HGNC: | 3095 |
UniProt: | B4DQW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.51e-11 | 32 |
muscle precursor cell | 3.59e-10 | 58 |
myoblast | 3.59e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.59e-10 | 58 |
smooth muscle cell | 3.65e-10 | 43 |
smooth muscle myoblast | 3.65e-10 | 43 |
embryonic cell | 2.42e-09 | 250 |
muscle cell | 2.90e-09 | 55 |
mesodermal cell | 6.93e-09 | 121 |
electrically responsive cell | 2.46e-07 | 61 |
electrically active cell | 2.46e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.19e-10 | 83 |
vasculature | 1.41e-10 | 78 |
vascular system | 1.41e-10 | 78 |
artery | 9.27e-10 | 42 |
arterial blood vessel | 9.27e-10 | 42 |
arterial system | 9.27e-10 | 42 |
multilaminar epithelium | 4.23e-09 | 83 |
epithelial tube open at both ends | 4.76e-09 | 59 |
blood vessel | 4.76e-09 | 59 |
blood vasculature | 4.76e-09 | 59 |
vascular cord | 4.76e-09 | 59 |
cardiovascular system | 6.93e-09 | 109 |
skeletal muscle tissue | 8.98e-09 | 62 |
striated muscle tissue | 8.98e-09 | 62 |
myotome | 8.98e-09 | 62 |
vessel | 1.71e-08 | 68 |
circulatory system | 3.12e-08 | 112 |
muscle tissue | 3.74e-08 | 64 |
musculature | 3.74e-08 | 64 |
musculature of body | 3.74e-08 | 64 |
somite | 3.75e-08 | 71 |
presomitic mesoderm | 3.75e-08 | 71 |
presumptive segmental plate | 3.75e-08 | 71 |
dermomyotome | 3.75e-08 | 71 |
trunk paraxial mesoderm | 3.75e-08 | 71 |
paraxial mesoderm | 7.03e-08 | 72 |
presumptive paraxial mesoderm | 7.03e-08 | 72 |
dense mesenchyme tissue | 1.29e-07 | 73 |
epithelial vesicle | 1.31e-07 | 78 |
systemic artery | 1.87e-07 | 33 |
systemic arterial system | 1.87e-07 | 33 |