FFCP PHASE1:Hg19::chr1:160854982..160854991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55600 | |EntrezGene=55600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18259 | |HGNC=18259 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWA0 | |UniProt=Q8WWA0 | ||
|association_with_transcript=-22bp_to_ENST00000326245,NM_017625,uc001fxc.2_5end | |association_with_transcript=-22bp_to_ENST00000326245,NM_017625,uc001fxc.2_5end | ||
|cluster_id=chr1:160854982..160854991,- | |||
|description=CAGE_peak_2_at_ITLN1_5end | |description=CAGE_peak_2_at_ITLN1_5end | ||
|id=chr1:160854982..160854991,- | |id=chr1:160854982..160854991,- | ||
|ontology_enrichment_celltype=CL:0000875!7.96e-09!3;CL:0002396!7.96e-09!3;CL:0002393!1.72e-07!9;CL:0002397!1.72e-07!9;CL:0000764!2.87e-07!2;CL:0000765!2.87e-07!2;CL:0000050!2.87e-07!2;CL:0000038!2.87e-07!2;CL:0000558!2.87e-07!2;CL:0000547!2.87e-07!2;CL:0000549!2.87e-07!2;CL:0000550!2.87e-07!2;CL:0000552!2.87e-07!2;CL:0002097!3.44e-07!2 | |ontology_enrichment_celltype=CL:0000875!7.96e-09!3;CL:0002396!7.96e-09!3;CL:0002393!1.72e-07!9;CL:0002397!1.72e-07!9;CL:0000764!2.87e-07!2;CL:0000765!2.87e-07!2;CL:0000050!2.87e-07!2;CL:0000038!2.87e-07!2;CL:0000558!2.87e-07!2;CL:0000547!2.87e-07!2;CL:0000549!2.87e-07!2;CL:0000550!2.87e-07!2;CL:0000552!2.87e-07!2;CL:0002097!3.44e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.23e-18;2!CL:0000558;1.23e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.23e-18,2;CL:0000765,1.23e-18,2;CL:0000050,1.23e-18,2;CL:0000038,1.23e-18,2;CL:0000558,1.23e-18,2;CL:0000547,1.23e-18,2;CL:0000549,1.23e-18,2;CL:0000550,1.23e-18,2;CL:0000552,1.23e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.49e-19;2!UBERON:0001045;1.81e-10;1!UBERON:0010227;3.45e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.42e-15!115;UBERON:0000178!3.40e-09!15;UBERON:0000179!3.40e-09!15;UBERON:0000463!3.40e-09!15;UBERON:0005409!5.27e-08!35 | |ontology_enrichment_uberon=UBERON:0007023!5.42e-15!115;UBERON:0000178!3.40e-09!15;UBERON:0000179!3.40e-09!15;UBERON:0000463!3.40e-09!15;UBERON:0005409!5.27e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.00e-24;17!UBERON:0005409;5.69e-19;22!UBERON:0002108;2.26e-17;4!UBERON:0001155;1.29e-16;9!UBERON:0000059;1.23e-13;11!UBERON:0004921;1.77e-11;33!UBERON:0001154;1.81e-10;1!UBERON:0001153;1.81e-10;1!UBERON:0002426;1.81e-10;1!UBERON:0003831;1.81e-10;1!UBERON:0003898;1.81e-10;1!UBERON:0004830;1.81e-10;1!UBERON:0009854;1.81e-10;1!UBERON:0003830;1.81e-10;1!UBERON:0005175;1.81e-10;1!UBERON:0001774;1.81e-10;1!UBERON:0001103;1.81e-10;1!UBERON:0002079;3.45e-10;1!UBERON:0000178;6.06e-10;15!UBERON:0000179;6.06e-10;15!UBERON:0000463;6.06e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.77e-24,17;UBERON:0002108,2.08e-17,4;UBERON:0005409,9.72e-17,25;UBERON:0001155,1.19e-16,9;UBERON:0000059,1.15e-13,11;UBERON:0007023,3.25e-13,114;UBERON:0001154,1.43e-10,1;UBERON:0001153,1.43e-10,1;UBERON:0001045,1.43e-10,1;UBERON:0002426,1.73e-10,1;UBERON:0003831,1.73e-10,1;UBERON:0003898,1.73e-10,1;UBERON:0004830,1.73e-10,1;UBERON:0003830,1.73e-10,1;UBERON:0005175,1.73e-10,1;UBERON:0001774,1.73e-10,1;UBERON:0001103,1.73e-10,1;UBERON:0010084,1.73e-10,1;UBERON:0002079,3.01e-10,1;UBERON:0000178,6.13e-10,15;UBERON:0000179,6.13e-10,15;UBERON:0000463,6.13e-10,15 | |||
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| ||
|short_description=p2@ITLN1 | |short_description=p2@ITLN1 | ||
}} | }} |
Latest revision as of 03:56, 18 September 2015
Short description: | p2@ITLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITLN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000326245, NM_017625, uc001fxc.2_5end |
EntrezGene: | ITLN1 |
HGNC: | 18259 |
UniProt: | Q8WWA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.23e-18 | 2 |
erythroblast | 1.23e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.23e-18 | 2 |
erythroid progenitor cell | 1.23e-18 | 2 |
reticulocyte | 1.23e-18 | 2 |
proerythroblast | 1.23e-18 | 2 |
basophilic erythroblast | 1.23e-18 | 2 |
polychromatophilic erythroblast | 1.23e-18 | 2 |
orthochromatic erythroblast | 1.23e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.77e-24 | 17 |
small intestine | 2.08e-17 | 4 |
gastrointestinal system | 9.72e-17 | 25 |
colon | 1.19e-16 | 9 |
large intestine | 1.15e-13 | 11 |
adult organism | 3.25e-13 | 114 |
vermiform appendix | 1.43e-10 | 1 |
caecum | 1.43e-10 | 1 |
midgut | 1.43e-10 | 1 |
chest muscle | 1.73e-10 | 1 |
respiratory system muscle | 1.73e-10 | 1 |
skeletal muscle of trunk | 1.73e-10 | 1 |
respiratory system skeletal muscle | 1.73e-10 | 1 |
thoracic segment muscle | 1.73e-10 | 1 |
chest organ | 1.73e-10 | 1 |
muscle of trunk | 1.73e-10 | 1 |
diaphragm | 1.73e-10 | 1 |
future diaphragm | 1.73e-10 | 1 |
left cardiac atrium | 3.01e-10 | 1 |
blood | 6.13e-10 | 15 |
haemolymphatic fluid | 6.13e-10 | 15 |
organism substance | 6.13e-10 | 15 |