FFCP PHASE1:Hg19::chr12:66026167..66026180,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:66026167..66026180,+
|short_description=p@chr12:66026167..66026180,+
|description=CAGE_peak_at_chr12:66026167..66026180,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:66026167..66026180,+ | |||
|description=CAGE_peak_at_chr12:66026167..66026180,+ | |||
|id=chr12:66026167..66026180,+ | |||
|ontology_enrichment_celltype=CL:0000359!8.71e-26!32;CL:0000192!1.62e-20!42;CL:0000514!1.62e-20!42;CL:0000680!2.97e-20!57;CL:0000056!2.97e-20!57;CL:0000355!2.97e-20!57;CL:0000187!5.52e-18!54;CL:0000183!6.05e-16!59;CL:0000393!1.41e-15!60;CL:0000211!1.41e-15!60;CL:0002539!1.04e-12!10;CL:0002594!2.65e-11!4;CL:0000055!2.36e-10!180;CL:0000220!4.85e-10!246;CL:0002321!7.14e-10!248;CL:0002371!1.57e-09!591;CL:0000144!4.81e-08!625;CL:0000222!5.51e-08!119;CL:0002540!5.10e-07!6;CL:0000723!8.72e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.05e-29;1!CL:0002594;4.21e-29;4!CL:0000359;2.77e-14;32!CL:0002592;9.43e-11;3!CL:1000306;1.70e-08;4!CL:0002547;1.70e-08;4!CL:0000192;2.62e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.20e-29,1;CL:0002594,4.21e-29,4;CL:0000359,1.28e-14,32;CL:0000192,5.16e-11,43;CL:0000514,5.16e-11,43;CL:0002592,7.42e-11,3;CL:0000187,1.03e-08,55;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4;CL:0000680,2.77e-08,58;CL:0000056,2.77e-08,58;CL:0000355,2.77e-08,58;CL:0000393,6.76e-08,61;CL:0000211,6.76e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.62e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.80e-11!14;DOID:120!3.65e-08!27;DOID:193!1.87e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.56e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.56e-09,14 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.21e-29,4;UBERON:0003498,1.61e-23,5;UBERON:0005985,1.61e-23,5;UBERON:0001637,3.46e-17,42;UBERON:0003509,3.46e-17,42;UBERON:0004572,3.46e-17,42;UBERON:0000078,2.74e-15,2;UBERON:0007497,2.74e-15,2;UBERON:0003643,2.74e-15,2;UBERON:0003504,2.74e-15,2;UBERON:0003469,2.74e-15,2;UBERON:0003496,2.74e-15,2;UBERON:0002012,2.74e-15,2;UBERON:0008886,2.74e-15,2;UBERON:0007303,2.74e-15,2;UBERON:0002061,2.74e-15,2;UBERON:0005432,2.74e-15,2;UBERON:0004363,2.74e-15,2;UBERON:0010260,1.49e-13,9;UBERON:0007500,2.40e-12,59;UBERON:0001981,2.40e-12,59;UBERON:0004537,2.40e-12,59;UBERON:0006965,2.40e-12,59;UBERON:0001621,7.42e-11,3;UBERON:0000055,9.32e-11,68;UBERON:0004145,1.20e-10,3;UBERON:0000992,1.08e-09,13;UBERON:0002049,2.04e-09,78;UBERON:0007798,2.04e-09,78;UBERON:0004872,7.26e-09,83;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0002119,2.26e-08,4;UBERON:0001134,8.93e-08,62;UBERON:0002036,8.93e-08,62;UBERON:0003082,8.93e-08,62;UBERON:0002385,1.52e-07,64;UBERON:0001015,1.52e-07,64;UBERON:0000383,1.52e-07,64;UBERON:0002118,5.70e-07,5;UBERON:0002329,7.70e-07,71;UBERON:0003059,7.70e-07,71;UBERON:0007282,7.70e-07,71;UBERON:0004290,7.70e-07,71;UBERON:0009618,7.70e-07,71;UBERON:0004535,8.33e-07,109;UBERON:0003077,9.47e-07,72;UBERON:0007285,9.47e-07,72 | |||
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| ||
|short_description=p@chr12:66026167..66026180,+ | |||
}} | }} |
Latest revision as of 11:26, 24 July 2015
Short description: | p@chr12:66026167..66026180, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:66026167..66026180, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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smooth muscle cell of the pulmonary artery | 4.20e-29 | 1 |
smooth muscle cell of the umbilical artery | 4.21e-29 | 4 |
vascular associated smooth muscle cell | 1.28e-14 | 32 |
smooth muscle cell | 5.16e-11 | 43 |
smooth muscle myoblast | 5.16e-11 | 43 |
smooth muscle cell of the coronary artery | 7.42e-11 | 3 |
muscle cell | 1.03e-08 | 55 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
muscle precursor cell | 2.77e-08 | 58 |
myoblast | 2.77e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.77e-08 | 58 |
electrically responsive cell | 6.76e-08 | 61 |
electrically active cell | 6.76e-08 | 61 |
Ontology term | p-value | n |
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ovarian cancer | 4.56e-09 | 14 |