FFCP PHASE1:Hg19::chr20:44441271..44441296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11065 | |EntrezGene=11065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15937 | |HGNC=15937 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAB7 | |UniProt=G3XAB7 | ||
|association_with_transcript=0bp_to_ENST00000243893,ENST00000335046_5end | |association_with_transcript=0bp_to_ENST00000243893,ENST00000335046_5end | ||
|cluster_id=chr20:44441271..44441296,+ | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_UBE2C_5end | |description=CAGE_peak_1_at_UBE2C_5end | ||
|id=chr20:44441271..44441296,+ | |id=chr20:44441271..44441296,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.62e-27!254;CL:0000548!2.14e-18!679;CL:0000004!2.14e-18!679;CL:0000255!2.14e-18!679;CL:0000012!3.27e-18!682;CL:0002321!8.69e-16!248;CL:0000220!5.47e-15!246;CL:0000003!4.71e-10!722;CL:0000055!3.37e-09!180;CL:0000133!1.08e-08!59;CL:0000333!1.16e-08!41;CL:0000221!3.45e-08!71;CL:0000076!9.03e-08!62;CL:0002319!5.82e-07!25;CL:0000063!9.29e-07!578 | |ontology_enrichment_celltype=CL:0000066!4.62e-27!254;CL:0000548!2.14e-18!679;CL:0000004!2.14e-18!679;CL:0000255!2.14e-18!679;CL:0000012!3.27e-18!682;CL:0002321!8.69e-16!248;CL:0000220!5.47e-15!246;CL:0000003!4.71e-10!722;CL:0000055!3.37e-09!180;CL:0000133!1.08e-08!59;CL:0000333!1.16e-08!41;CL:0000221!3.45e-08!71;CL:0000076!9.03e-08!62;CL:0002319!5.82e-07!25;CL:0000063!9.29e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.42e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.38e-27,253;CL:0002321,1.08e-15,250;CL:0000333,1.16e-08,41;CL:0000133,1.20e-08,59;CL:0000221,1.31e-07,72;CL:0000076,3.45e-07,63;CL:0002319,5.36e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.16e-40!235;DOID:14566!9.18e-40!239;DOID:0050687!1.46e-28!143;DOID:305!4.10e-21!106;DOID:0050686!1.84e-16!137 | |ontology_enrichment_disease=DOID:162!1.16e-40!235;DOID:14566!9.18e-40!239;DOID:0050687!1.46e-28!143;DOID:305!4.10e-21!106;DOID:0050686!1.84e-16!137 | ||
|ontology_enrichment_disease_v019=DOID:0050687;1.55e-07;143!DOID:305;3.20e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.69e-41,235;DOID:14566,1.38e-40,239;DOID:0050687,8.21e-29,143;DOID:305,2.59e-21,106;DOID:0050686,6.10e-17,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@UBE2C | |short_description=p1@UBE2C | ||
}} | }} |
Latest revision as of 12:28, 16 September 2015
Short description: | p1@UBE2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2C_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000243893, ENST00000335046_5end |
EntrezGene: | UBE2C |
HGNC: | 15937 |
UniProt: | G3XAB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.38e-27 | 253 |
embryonic cell | 1.08e-15 | 250 |
migratory neural crest cell | 1.16e-08 | 41 |
neurectodermal cell | 1.20e-08 | 59 |
ectodermal cell | 1.31e-07 | 72 |
squamous epithelial cell | 3.45e-07 | 63 |
neural cell | 5.36e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.69e-41 | 235 |
disease of cellular proliferation | 1.38e-40 | 239 |
cell type cancer | 8.21e-29 | 143 |
carcinoma | 2.59e-21 | 106 |
organ system cancer | 6.10e-17 | 137 |