FFCP PHASE1:Hg19::chr6:45390399..45390418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |EntrezGene=860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |HGNC=10472 | ||
|TSSclassifier=strong | |||
|UniProt=Q13950 | |UniProt=Q13950 | ||
|association_with_transcript=-30bp_to_L40992_5end | |association_with_transcript=-30bp_to_L40992_5end | ||
|cluster_id=chr6:45390399..45390418,+ | |||
|coexpression_cluster_id=C2860 | |||
|description=CAGE_peak_15_at_RUNX2_5end | |description=CAGE_peak_15_at_RUNX2_5end | ||
|id=chr6:45390399..45390418,+ | |id=chr6:45390399..45390418,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.83e-14;8!CL:0000081;5.24e-14;11!CL:0000784;9.57e-12;3!CL:0002603;8.38e-11;3!CL:0000064;5.66e-10;3!CL:0000067;5.66e-10;3!CL:0005012;5.66e-10;3!CL:0002304;5.66e-10;3!CL:0000771;1.13e-07;2!CL:0002588;3.38e-07;2!CL:0000084;7.26e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.81e-14,8;CL:0000081,7.61e-14,11;CL:0000784,9.33e-12,3;CL:0002603,5.14e-11,3;CL:0000064,3.78e-10,3;CL:0000067,3.78e-10,3;CL:0005012,3.78e-10,3;CL:0002304,3.78e-10,3;CL:0000771,1.28e-07,2;CL:0002588,1.56e-07,2;CL:0000084,6.22e-07,25;CL:0000827,6.22e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.66e-10;3!UBERON:0001775;5.66e-10;3!UBERON:0000488;1.38e-07;4!UBERON:0007625;5.02e-07;11!UBERON:0004733;9.90e-07;12!UBERON:0002028;9.90e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.78e-10,3;UBERON:0001775,3.78e-10,3;UBERON:0000488,1.03e-07,4;UBERON:0003076,1.62e-07,15;UBERON:0003057,1.62e-07,15;UBERON:0007625,4.38e-07,11;UBERON:0004733,8.50e-07,12;UBERON:0002028,8.50e-07,12;UBERON:0007277,8.50e-07,12 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,3.20114750999649,2.44800829493104,1.88072832886853,0,0.547497700291537,0.251085279189606,0,0,0,0.786728553697808,1.53531759238885,1.08371286321253,0,0,0,0,0,1.46800219667424,0.553995408531877,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0.436194716338694,1.51150377475524,0.485168122375632,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.449446968890169,0.306083892370903,0.962787081228281,0,0.329851300186716,0,0.852449501065388,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,2.24203425192614,1.31692042387539,0.393419540227666,1.17903228824749,1.85041349099558,0,0,0,0,1.33692548262208,0.589211814949674,0.886135578334485,1.35401931882508,1.0247305578054,1.04047478047903,0.164437904603676,0.552700035571697,0,0,0,0,0.566546713487831,1.91610246800961,0.68725489096526,0.506039384039006,0.318565414324097,0,0.950452044448374,0.150575119077773,0.511946444617674,1.24930726552346,0,0.821127996921047,1.61285394579786,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0.144846518960824,0,0,1.13441780596881,1.55210578223795,1.93236528524877,0,0,0,0,0,0,10.9705687180457,8.57992366170192,10.4008100372278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.605429710579726,0,0.70296429550139,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.375355559615893,0,0.438977620880838,0.919463387397059,0,0,0.538168907066586,0.640672166455702,0.423863802319124,0,0.515262646192195,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.276149695926898,0,0.355009592516614,0.302256294682921,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,2.88662684050547,0.695582429850461,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,1.65862492432618,5.18831832301061,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,1.64648067356154,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0.358121926479791,0,0.985153801009636,0.646882724578552,1.28343036279748,0,0,0,0,0,3.74503511973591,0,2.07207756718018,0.49076596687656,0.500170521059677,0,1.24782516918484,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0,0.391602314925481,0.343143423810856,0.413536052245775,0,0.74709290462411,0,0,0,0,0.61384789315225,0.280660094433074,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0,0.40101294060657,0,0.459257792658427,0.546273504020151,0.393373244878272,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0,1.00337954770971,0,0,1.56712328305525,0,0,0.256450125116389,0,0,0,0.915694648183434,1.48517099857058,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.964856007391714,0.429680979473094,0.435050081742686,0.340906509664404,0.0890320356467374,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0,0.571890581771475,0,0,0,0,0.359744915166629,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0.545999645631943,0.565621727814851,0,0,0,0,0,0,0,0,0,1.86434757865267,1.57198465620994,0,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0,0,0.80719882876419,0,0.343505344755765,0,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0.852408440419239,0.23874448473769,0,0,0.994147647766298,0,2.22617410045812,9.3938208309253,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0.269605053441981,0,1.02314474045374,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,2.96249345202203,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,2.37216902944498,0.86494757262552,0.730953646538188,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.884612114798832,0,0,0,0,0.313932918407225,0,0,0,0,0.097992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| ||
|short_description=p15@RUNX2 | |short_description=p15@RUNX2 | ||
}} | }} |
Latest revision as of 01:29, 19 September 2015
Short description: | p15@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RUNX2_5end |
Coexpression cluster: | C2860_Dendritic_Mast_granulocyte_Neutrophils_gall_anaplastic_pagetoid |
Association with transcript: | -30bp_to_L40992_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | Q13950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.81e-14 | 8 |
blood cell | 7.61e-14 | 11 |
plasmacytoid dendritic cell | 9.33e-12 | 3 |
astrocyte of the cerebellum | 5.14e-11 | 3 |
ciliated cell | 3.78e-10 | 3 |
ciliated epithelial cell | 3.78e-10 | 3 |
multi-ciliated epithelial cell | 3.78e-10 | 3 |
non-pigmented ciliary epithelial cell | 3.78e-10 | 3 |
eosinophil | 1.28e-07 | 2 |
smooth muscle cell of the umbilical vein | 1.56e-07 | 2 |
T cell | 6.22e-07 | 25 |
pro-T cell | 6.22e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.78e-10 | 3 |
ciliary body | 3.78e-10 | 3 |
atypical epithelium | 1.03e-07 | 4 |
posterior neural tube | 1.62e-07 | 15 |
chordal neural plate | 1.62e-07 | 15 |
pigment epithelium of eye | 4.38e-07 | 11 |
segmental subdivision of hindbrain | 8.50e-07 | 12 |
hindbrain | 8.50e-07 | 12 |
presumptive hindbrain | 8.50e-07 | 12 |