FFCP PHASE1:Hg19::chr20:61200640..61200653,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:61200640..61200653,- | |||
|description=CAGE_peak_at_chr20:61200640..61200653,- | |description=CAGE_peak_at_chr20:61200640..61200653,- | ||
|id=chr20:61200640..61200653,- | |id=chr20:61200640..61200653,- | ||
|ontology_enrichment_celltype=CL:0000763!8.01e-25!112;CL:0000049!8.01e-25!112;CL:0000766!3.86e-24!76;CL:0000860!3.23e-21!45;CL:0000037!1.35e-19!172;CL:0000566!1.35e-19!172;CL:0002032!3.31e-19!165;CL:0000837!3.31e-19!165;CL:0000839!1.37e-18!70;CL:0002057!4.07e-18!42;CL:0000988!1.33e-17!182;CL:0002194!3.31e-16!63;CL:0000576!3.31e-16!63;CL:0000040!3.31e-16!63;CL:0000559!3.31e-16!63;CL:0000738!5.42e-16!140;CL:0000557!1.28e-15!71;CL:0002009!1.91e-15!65;CL:0002031!2.18e-12!124;CL:0002087!9.81e-12!119;CL:0000094!1.03e-11!8;CL:0000081!4.16e-08!11;CL:0000775!4.27e-07!3 | |ontology_enrichment_celltype=CL:0000763!8.01e-25!112;CL:0000049!8.01e-25!112;CL:0000766!3.86e-24!76;CL:0000860!3.23e-21!45;CL:0000037!1.35e-19!172;CL:0000566!1.35e-19!172;CL:0002032!3.31e-19!165;CL:0000837!3.31e-19!165;CL:0000839!1.37e-18!70;CL:0002057!4.07e-18!42;CL:0000988!1.33e-17!182;CL:0002194!3.31e-16!63;CL:0000576!3.31e-16!63;CL:0000040!3.31e-16!63;CL:0000559!3.31e-16!63;CL:0000738!5.42e-16!140;CL:0000557!1.28e-15!71;CL:0002009!1.91e-15!65;CL:0002031!2.18e-12!124;CL:0002087!9.81e-12!119;CL:0000094!1.03e-11!8;CL:0000081!4.16e-08!11;CL:0000775!4.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.05e-30;8!CL:0000775;1.05e-29;3!CL:0000081;5.40e-22;11!CL:0002127;3.08e-11;1!CL:0000911;3.08e-11;1!CL:0000814;3.08e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.70e-30,8;CL:0000775,9.11e-30,3;CL:0000081,4.95e-22,11;CL:0002127,3.08e-11,1;CL:0000914,3.08e-11,1;CL:0000911,3.08e-11,1;CL:0000814,3.08e-11,1;CL:0002042,3.08e-11,1;CL:0002039,3.08e-11,1;CL:0002040,3.08e-11,1;CL:0002041,3.08e-11,1;CL:0000766,2.18e-07,72;CL:0000763,2.80e-07,108;CL:0000049,2.80e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:225;1.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:225,1.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.50e-19!102;UBERON:0003061!4.50e-19!102;UBERON:0002193!2.54e-18!112;UBERON:0002371!7.24e-13!80;UBERON:0001474!2.07e-12!86;UBERON:0002405!1.81e-11!115;UBERON:0004765!2.77e-09!101;UBERON:0001434!2.77e-09!101;UBERON:0002394!2.45e-07!4;UBERON:0003928!2.45e-07!4 | |ontology_enrichment_uberon=UBERON:0002390!4.50e-19!102;UBERON:0003061!4.50e-19!102;UBERON:0002193!2.54e-18!112;UBERON:0002371!7.24e-13!80;UBERON:0001474!2.07e-12!86;UBERON:0002405!1.81e-11!115;UBERON:0004765!2.77e-09!101;UBERON:0001434!2.77e-09!101;UBERON:0002394!2.45e-07!4;UBERON:0003928!2.45e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.383829398097213,0.464448369948228,0,0,0,0.387336002901508,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0,0.575384784644301,0,0.47296445977717,1.03423704220986,1.93645405075148,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.962787081228281,0,0.659702600373432,0.797854630486527,0,0.290209238628584,0,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.626909658919938,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83719378360516,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.99602809578873,5.9832291840805,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0.188287601553558,0,0,0,0,0,3.0585488285695,1.13929437434833,0.476463550915578,0.411362273086194,0,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0.997896857164083,0,2.11673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,2.06103206853459,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0.556543525114529,8.24019371133798,0,0,0,0,0,0,0,0.718946809178615,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.227884111694002,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0,0,0.0967563312890851,0.730893170861856,0.0821154570532092,0,0,0,1.37041924646751,0.397429223405979,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,1.17847017308398,0,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,1.17360902663555,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.462102664601353,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.444925607568277,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.383829398097213,0.464448369948228,0,0,0,0.387336002901508,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0,0.575384784644301,0,0.47296445977717,1.03423704220986,1.93645405075148,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.962787081228281,0,0.659702600373432,0.797854630486527,0,0.290209238628584,0,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.626909658919938,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83719378360516,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.99602809578873,5.9832291840805,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0.188287601553558,0,0,0,0,0,3.0585488285695,1.13929437434833,0.476463550915578,0.411362273086194,0,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0.997896857164083,0,2.11673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,2.06103206853459,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0.556543525114529,8.24019371133798,0,0,0,0,0,0,0,0.718946809178615,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.227884111694002,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0,0,0.0967563312890851,0.730893170861856,0.0821154570532092,0,0,0,1.37041924646751,0.397429223405979,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,1.17847017308398,0,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,1.17360902663555,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.462102664601353,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.444925607568277,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:61200640..61200653,- | |short_description=p@chr20:61200640..61200653,- | ||
}} | }} |
Latest revision as of 16:11, 28 July 2015
Short description: | p@chr20:61200640..61200653, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:61200640..61200653, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.70e-30 | 8 |
neutrophil | 9.11e-30 | 3 |
blood cell | 4.95e-22 | 11 |
innate effector T cell | 3.08e-11 | 1 |
immature NK T cell | 3.08e-11 | 1 |
effector T cell | 3.08e-11 | 1 |
mature NK T cell | 3.08e-11 | 1 |
immature NK T cell stage IV | 3.08e-11 | 1 |
immature NK T cell stage I | 3.08e-11 | 1 |
immature NK T cell stage II | 3.08e-11 | 1 |
immature NK T cell stage III | 3.08e-11 | 1 |
myeloid leukocyte | 2.18e-07 | 72 |
myeloid cell | 2.80e-07 | 108 |
common myeloid progenitor | 2.80e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
syndrome | 1.33e-10 | 1 |