FFCP PHASE1:Hg19::chr6:73076442..73076455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCZ1,B7Z2Q9,B7Z6S2,Q3ZCW0 | |UniProt=E9PCZ1,B7Z2Q9,B7Z6S2,Q3ZCW0 | ||
|association_with_transcript=10bp_to_ENST00000414192,NM_001168411_5end | |association_with_transcript=10bp_to_ENST00000414192,NM_001168411_5end | ||
|cluster_id=chr6:73076442..73076455,+ | |||
|description=CAGE_peak_23_at_RIMS1_5end | |description=CAGE_peak_23_at_RIMS1_5end | ||
|id=chr6:73076442..73076455,+ | |id=chr6:73076442..73076455,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;2.16e-26;1!CL:0000819;2.16e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.16e-26,1;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0000817,1.01e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.06e-26;1!UBERON:0009143;8.64e-26;1!CL:0000954;6.43e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.16e-26;1!DOID:8675;2.16e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.16e-26,1;DOID:8675,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-18!115;UBERON:0001049!5.89e-17!57;UBERON:0005068!5.89e-17!57;UBERON:0006241!5.89e-17!57;UBERON:0007135!5.89e-17!57;UBERON:0001896!6.03e-15!3;UBERON:0005290!6.03e-15!3;UBERON:0010096!6.03e-15!3;UBERON:0002298!1.39e-14!8;UBERON:0003076!1.43e-14!15;UBERON:0003057!1.43e-14!15;UBERON:0002616!4.26e-14!59;UBERON:0004733!1.38e-13!12;UBERON:0002028!1.38e-13!12;UBERON:0007277!1.38e-13!12;UBERON:0003075!2.96e-13!86;UBERON:0007284!2.96e-13!86;UBERON:0000955!4.12e-13!69;UBERON:0006238!4.12e-13!69;UBERON:0005743!4.77e-13!86;UBERON:0002346!1.70e-12!90;UBERON:0004732!1.70e-12!13;UBERON:0001017!3.94e-12!82;UBERON:0000073!1.82e-11!94;UBERON:0001016!1.82e-11!94;UBERON:0001897!1.42e-10!2;UBERON:0002780!2.07e-07!41;UBERON:0001890!2.07e-07!41;UBERON:0006240!2.07e-07!41;UBERON:0003080!3.33e-07!42;UBERON:0000988!4.08e-07!3;UBERON:0000033!5.57e-07!123;UBERON:0001894!9.48e-07!7;UBERON:0006222!9.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;1.29e-13;2!UBERON:0010225;1.29e-13;2!UBERON:0002110;1.24e-09;3!UBERON:0001043;1.60e-09;3!UBERON:0001052;1.54e-07;4!UBERON:0004921;1.84e-07;33!UBERON:0002784;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,1.07e-13,2;UBERON:0010225,1.07e-13,2;UBERON:0002110,1.30e-09,3;UBERON:0006242,1.30e-09,3;UBERON:0001043,1.54e-09,3;UBERON:0009143,1.54e-09,3;UBERON:0001052,1.49e-07,4;UBERON:0002784,1.69e-07,4 | |||
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|short_description=p23@RIMS1 | |short_description=p23@RIMS1 | ||
}} | }} |
Latest revision as of 16:59, 19 September 2015
Short description: | p23@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RIMS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000414192, NM_001168411_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | E9PCZ1B7Z2Q9B7Z6S2Q3ZCW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.16e-26 | 1 |
mature B cell | 6.43e-14 | 2 |
pre-B-II cell | 6.43e-14 | 2 |
transitional stage B cell | 6.43e-14 | 2 |
small pre-B-II cell | 6.43e-14 | 2 |
immature B cell | 6.43e-14 | 2 |
precursor B cell | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 1.07e-13 | 2 |
thalamic complex | 1.07e-13 | 2 |
gallbladder | 1.30e-09 | 3 |
gall bladder primordium | 1.30e-09 | 3 |
esophagus | 1.54e-09 | 3 |
esophageal region | 1.54e-09 | 3 |
rectum | 1.49e-07 | 4 |
regional part of diencephalon | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.16e-26 | 1 |
lymphosarcoma | 2.16e-26 | 1 |