FFCP PHASE1:Hg19::chr7:45039823..45039871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83605 | |EntrezGene=83605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21708 | |HGNC=21708 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEC4,Q6P456 | |UniProt=E9PEC4,Q6P456 | ||
|association_with_transcript=0bp_to_ENST00000488727,ENST00000543541_5end | |association_with_transcript=0bp_to_ENST00000488727,ENST00000543541_5end | ||
|cluster_id=chr7:45039823..45039871,+ | |||
|description=CAGE_peak_1_at_CCM2_5end | |description=CAGE_peak_1_at_CCM2_5end | ||
|id=chr7:45039823..45039871,+ | |id=chr7:45039823..45039871,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.16e-17!591;CL:0000144!1.36e-13!625;CL:0000222!2.16e-11!119;CL:0000183!1.11e-10!59;CL:0000003!1.77e-10!722;CL:0000220!5.26e-10!246;CL:0000680!1.58e-09!57;CL:0000056!1.58e-09!57;CL:0000355!1.58e-09!57;CL:0002321!2.59e-09!248;CL:0000187!4.54e-09!54;CL:0000548!1.02e-08!679;CL:0000004!1.02e-08!679;CL:0000255!1.02e-08!679;CL:0000359!1.63e-08!32;CL:0000055!3.26e-08!180;CL:0000012!6.78e-08!682;CL:0000192!6.88e-08!42;CL:0000514!6.88e-08!42;CL:0000393!7.75e-07!60;CL:0000211!7.75e-07!60;CL:0000723!8.12e-07!436 | |ontology_enrichment_celltype=CL:0002371!1.16e-17!591;CL:0000144!1.36e-13!625;CL:0000222!2.16e-11!119;CL:0000183!1.11e-10!59;CL:0000003!1.77e-10!722;CL:0000220!5.26e-10!246;CL:0000680!1.58e-09!57;CL:0000056!1.58e-09!57;CL:0000355!1.58e-09!57;CL:0002321!2.59e-09!248;CL:0000187!4.54e-09!54;CL:0000548!1.02e-08!679;CL:0000004!1.02e-08!679;CL:0000255!1.02e-08!679;CL:0000359!1.63e-08!32;CL:0000055!3.26e-08!180;CL:0000012!6.78e-08!682;CL:0000192!6.88e-08!42;CL:0000514!6.88e-08!42;CL:0000393!7.75e-07!60;CL:0000211!7.75e-07!60;CL:0000723!8.12e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.13e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.05e-12,121;CL:0002321,1.26e-09,250;CL:0000680,1.53e-09,58;CL:0000056,1.53e-09,58;CL:0000355,1.53e-09,58;CL:0000187,4.39e-09,55;CL:0000359,1.63e-08,32;CL:0000192,6.77e-08,43;CL:0000514,6.77e-08,43;CL:0000723,2.37e-07,433;CL:0000393,7.17e-07,61;CL:0000211,7.17e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.24e-12!42;UBERON:0003509!8.24e-12!42;UBERON:0004572!8.24e-12!42;UBERON:0001981!5.91e-11!60;UBERON:0007500!5.91e-11!60;UBERON:0004537!5.91e-11!60;UBERON:0006965!5.91e-11!60;UBERON:0004872!8.99e-11!84;UBERON:0003914!9.04e-11!118;UBERON:0002049!1.25e-10!79;UBERON:0007798!1.25e-10!79;UBERON:0000119!2.36e-10!312;UBERON:0000055!3.11e-10!69;UBERON:0000486!4.22e-10!82;UBERON:0000483!4.73e-10!309;UBERON:0004535!1.37e-09!110;UBERON:0001009!1.78e-09!113;UBERON:0004290!2.73e-09!70;UBERON:0000914!6.81e-09!83;UBERON:0002329!6.81e-09!83;UBERON:0003077!6.81e-09!83;UBERON:0003059!6.81e-09!83;UBERON:0007282!6.81e-09!83;UBERON:0009618!6.81e-09!83;UBERON:0007285!6.81e-09!83;UBERON:0000025!1.86e-08!194;UBERON:0004573!2.68e-08!33;UBERON:0004571!2.68e-08!33;UBERON:0001134!4.49e-08!61;UBERON:0002036!4.49e-08!61;UBERON:0003082!4.49e-08!61;UBERON:0004111!2.30e-07!241;UBERON:0005256!2.98e-07!143;UBERON:0002385!3.84e-07!63;UBERON:0001015!3.84e-07!63;UBERON:0000383!3.84e-07!63;UBERON:0000490!5.69e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.37e-08;42!UBERON:0003509;2.37e-08;42!UBERON:0004572;2.37e-08;42!UBERON:0007500;2.12e-07;56!UBERON:0001981;2.12e-07;56!UBERON:0004537;2.12e-07;56!UBERON:0004573;2.75e-07;33!UBERON:0004571;2.75e-07;33!UBERON:0003914;8.54e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.24e-12,42;UBERON:0003509,8.24e-12,42;UBERON:0004572,8.24e-12,42;UBERON:0007503,8.27e-12,78;UBERON:0000119,3.74e-11,309;UBERON:0000483,7.70e-11,306;UBERON:0007500,9.92e-11,59;UBERON:0001981,9.92e-11,59;UBERON:0004537,9.92e-11,59;UBERON:0006965,9.92e-11,59;UBERON:0003914,1.00e-10,117;UBERON:0004872,1.48e-10,83;UBERON:0002049,2.05e-10,78;UBERON:0007798,2.05e-10,78;UBERON:0000486,3.91e-10,83;UBERON:0000055,5.14e-10,68;UBERON:0004535,2.17e-09,109;UBERON:0002329,2.56e-09,71;UBERON:0003059,2.56e-09,71;UBERON:0007282,2.56e-09,71;UBERON:0004290,2.56e-09,71;UBERON:0009618,2.56e-09,71;UBERON:0001009,2.80e-09,112;UBERON:0003077,3.13e-09,72;UBERON:0007285,3.13e-09,72;UBERON:0007524,4.45e-09,73;UBERON:0000025,1.21e-08,192;UBERON:0004573,2.68e-08,33;UBERON:0004571,2.68e-08,33;UBERON:0001134,4.21e-08,62;UBERON:0002036,4.21e-08,62;UBERON:0003082,4.21e-08,62;UBERON:0000490,4.28e-08,148;UBERON:0004111,1.83e-07,240;UBERON:0002385,3.55e-07,64;UBERON:0001015,3.55e-07,64;UBERON:0000383,3.55e-07,64 | |||
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| ||
|short_description=p1@CCM2 | |short_description=p1@CCM2 | ||
}} | }} |
Latest revision as of 18:38, 18 September 2015
Short description: | p1@CCM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000488727, ENST00000543541_5end |
EntrezGene: | CCM2 |
HGNC: | 21708 |
UniProt: | E9PEC4Q6P456 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.05e-12 | 121 |
embryonic cell | 1.26e-09 | 250 |
muscle precursor cell | 1.53e-09 | 58 |
myoblast | 1.53e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-09 | 58 |
muscle cell | 4.39e-09 | 55 |
vascular associated smooth muscle cell | 1.63e-08 | 32 |
smooth muscle cell | 6.77e-08 | 43 |
smooth muscle myoblast | 6.77e-08 | 43 |
somatic stem cell | 2.37e-07 | 433 |
electrically responsive cell | 7.17e-07 | 61 |
electrically active cell | 7.17e-07 | 61 |