FFCP PHASE1:Hg19::chr7:81662338..81662349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=781 | |EntrezGene=781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |HGNC=1399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000464354_5end | |association_with_transcript=38bp_to_ENST00000464354_5end | ||
|cluster_id=chr7:81662338..81662349,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_16_at_CACNA2D1_5end | |description=CAGE_peak_16_at_CACNA2D1_5end | ||
|id=chr7:81662338..81662349,- | |id=chr7:81662338..81662349,- | ||
|ontology_enrichment_celltype=CL:0002274!1.47e-37!5;CL:0000457!1.47e-37!5;CL:0002191!1.47e-37!5;CL:0000097!1.47e-37!5;CL:0000831!1.47e-37!5;CL:0002028!1.47e-37!5;CL:0000163!7.95e-21!9;CL:1000413!3.43e-13!9;CL:0002139!2.23e-10!24;CL:0000071!6.76e-10!18;CL:0002546!6.76e-10!18;CL:0000115!5.99e-07!35 | |ontology_enrichment_celltype=CL:0002274!1.47e-37!5;CL:0000457!1.47e-37!5;CL:0002191!1.47e-37!5;CL:0000097!1.47e-37!5;CL:0000831!1.47e-37!5;CL:0002028!1.47e-37!5;CL:0000163!7.95e-21!9;CL:1000413!3.43e-13!9;CL:0002139!2.23e-10!24;CL:0000071!6.76e-10!18;CL:0002546!6.76e-10!18;CL:0000115!5.99e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.34e-163;5!CL:0000163;3.38e-91;9!CL:0000151;2.50e-21;36!CL:0000766;6.52e-08;69!CL:0002544;9.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.34e-163,5;CL:0002028,2.34e-163,5;CL:0000163,3.38e-91,9;CL:0000151,2.31e-23,36;CL:0000839,8.32e-13,66;CL:0000557,1.26e-12,67;CL:0000766,8.59e-12,72;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0002031,2.87e-07,120;CL:0002544,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!1.02e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003915!3.43e-13!9;UBERON:0004700!3.43e-13!9;UBERON:0001917!3.43e-13!9;UBERON:0001986!6.76e-10!18;UBERON:0004638!6.76e-10!18;UBERON:0004852!6.76e-10!18;UBERON:0006834!1.71e-08!1;UBERON:0002336!4.07e-08!1;UBERON:0001018!4.07e-08!1;UBERON:0002473!4.07e-08!1;UBERON:0005340!4.07e-08!1;UBERON:0002316!4.07e-08!1;UBERON:0003544!4.07e-08!1;UBERON:0001020!4.07e-08!1;UBERON:0005970!4.07e-08!1;UBERON:0002437!4.07e-08!1;UBERON:0000487!4.66e-08!22;UBERON:0007023!7.49e-08!115;UBERON:0006914!4.60e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108 | |||
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|short_description=p16@CACNA2D1 | |short_description=p16@CACNA2D1 | ||
}} | }} |
Latest revision as of 18:18, 19 September 2015
Short description: | p16@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CACNA2D1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 38bp_to_ENST00000464354_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.34e-163 | 5 |
basophil mast progenitor cell | 2.34e-163 | 5 |
endocrine cell | 3.38e-91 | 9 |
secretory cell | 2.31e-23 | 36 |
myeloid lineage restricted progenitor cell | 8.32e-13 | 66 |
granulocyte monocyte progenitor cell | 1.26e-12 | 67 |
myeloid leukocyte | 8.59e-12 | 72 |
myeloid cell | 4.95e-08 | 108 |
common myeloid progenitor | 4.95e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
aortic endothelial cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.34e-11 | 76 |
bone element | 2.00e-10 | 82 |
skeletal element | 1.52e-09 | 90 |
immune system | 2.97e-09 | 93 |
hematopoietic system | 8.34e-09 | 98 |
blood island | 8.34e-09 | 98 |
skeletal system | 1.22e-08 | 100 |
hemolymphoid system | 4.95e-08 | 108 |