FFCP PHASE1:Hg19::chr8:104512465..104512483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | |UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | ||
|association_with_transcript=-492bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | |association_with_transcript=-492bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | ||
|cluster_id=chr8:104512465..104512483,+ | |||
|description=CAGE_peak_16_at_RIMS2_5end | |description=CAGE_peak_16_at_RIMS2_5end | ||
|id=chr8:104512465..104512483,+ | |id=chr8:104512465..104512483,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.54e-09!5;CL:0002319!1.17e-07!25 | |ontology_enrichment_celltype=CL:0002322!2.54e-09!5;CL:0002319!1.17e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.94e-18;6!CL:0000404;2.94e-18;6!CL:0002322;2.84e-10;5!CL:0002321;1.47e-07;15!CL:0002319;3.40e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-18,6;CL:0000031,1.84e-18,6;CL:0000404,1.84e-18,6;CL:0000047,5.28e-14,8;CL:0002322,3.76e-10,5;CL:0002319,2.79e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.94e-18;6!UBERON:0006215;1.74e-16;3 | |||
|ontology_enrichment_disease=DOID:169!3.10e-07!6;DOID:3095!8.63e-07!22;DOID:2994!8.63e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3347;2.05e-13;1!DOID:154;3.92e-07;2!DOID:4236;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.32e-13,1;DOID:154,4.69e-07,2;DOID:4236,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.55e-35!94;UBERON:0001016!4.55e-35!94;UBERON:0001017!1.34e-32!82;UBERON:0005743!9.02e-32!86;UBERON:0000955!1.89e-31!69;UBERON:0006238!1.89e-31!69;UBERON:0001049!1.06e-30!57;UBERON:0005068!1.06e-30!57;UBERON:0006241!1.06e-30!57;UBERON:0007135!1.06e-30!57;UBERON:0002780!4.45e-30!41;UBERON:0001890!4.45e-30!41;UBERON:0006240!4.45e-30!41;UBERON:0002616!2.92e-29!59;UBERON:0003080!3.88e-29!42;UBERON:0001869!2.82e-25!32;UBERON:0002020!4.95e-25!34;UBERON:0003528!4.95e-25!34;UBERON:0001893!2.30e-23!34;UBERON:0002791!3.62e-22!33;UBERON:0003056!7.61e-20!61;UBERON:0000956!2.97e-19!25;UBERON:0000203!2.97e-19!25;UBERON:0003075!9.86e-19!86;UBERON:0007284!9.86e-19!86;UBERON:0001950!7.20e-18!20;UBERON:0002619!8.31e-18!22;UBERON:0002346!2.22e-17!90;UBERON:0004121!4.63e-16!169;UBERON:0000033!1.59e-15!123;UBERON:0000924!2.51e-15!173;UBERON:0006601!2.51e-15!173;UBERON:0000153!5.85e-15!129;UBERON:0007811!5.85e-15!129;UBERON:0007023!3.78e-11!115;UBERON:0002021!1.94e-08!5;UBERON:0001894!2.60e-08!7;UBERON:0006222!2.60e-08!7;UBERON:0002308!3.24e-07!9;UBERON:0000125!3.24e-07!9;UBERON:0003296!3.55e-07!4;UBERON:0010133!3.55e-07!4;UBERON:0000473!8.56e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.04e-08;6!UBERON:0000007;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.96e-14,89;UBERON:0001017,6.31e-13,81;UBERON:0002037,1.00e-08,6;UBERON:0006215,1.00e-08,6;UBERON:0000955,1.32e-07,68;UBERON:0006238,1.32e-07,68;UBERON:0000007,5.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.34171076742555,0.662648841607426,0.464775771478074,0.518305275076852,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.330037999682352,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0.16480387422676,0,0,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,0,1.38899995946634,0,0.120596438625408,1.52581736317083,1.65868889896837,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0,0,0.61214552326098,0,0.300646838828985,0,0.664653872707185,0.330991955875499,0.627865836814451,0,0.284609546029793,0,0,0,0.174118413160805,0,0,0,0,0,0,0.441280633457501,0,0,0,0.379864775735272,0.195551382734803,0,0,0.19980960958213,0,0.229073192331831,5.66263492944483,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,2.08979093004525,1.92555211236127,1.66176135211674,0,0,0.303747783290123,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0.18628920882415,1.798532254171,0,0,0,0,0.936669811613763,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0.646948868380091,0.157265941855896,1.52893493468819,0,0,0,0,0,0,0,0,0,0.385375350578757,2.8339315265117,0.159633859057151,0.205116364240755,0.756215088665154,0.484100767249525,0.807378228159255,0,0.0981477185010256,0,0,0,0,2.0710797781803,0,0,0.40341013740704,0,0,0,0,0.337687923091973,0,0.413373593002368,0.0634158101939068,1.64092442705466,0,0,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.227662191351298,0,0.345701962667338,0,0.339848664884159,0.0657727735628491,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.237840181555137,0.22589216407792,0,0.905777061400041,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.380095503034311,1.1218771271618,0.26721740526556,0.18378979906969,0.50141507858475,0.0757786982182394,0.803892390468535,0.829169439458779,0.20686599172379,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0.569822880276821,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p16@RIMS2 | |short_description=p16@RIMS2 | ||
}} | }} |
Latest revision as of 00:45, 25 September 2015
Short description: | p16@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -492bp_to_ENST00000504942, NM_001100117, uc003ylp.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E9PFB6B3KX91F8WD47Q9UQ26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.84e-18 | 6 |
neuroblast | 1.84e-18 | 6 |
electrically signaling cell | 1.84e-18 | 6 |
neuronal stem cell | 5.28e-14 | 8 |
embryonic stem cell | 3.76e-10 | 5 |
neural cell | 2.79e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.96e-14 | 89 |
central nervous system | 6.31e-13 | 81 |
cerebellum | 1.00e-08 | 6 |
rhombic lip | 1.00e-08 | 6 |
brain | 1.32e-07 | 68 |
future brain | 1.32e-07 | 68 |
pituitary gland | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.32e-13 | 1 |
mixed cell type cancer | 4.69e-07 | 2 |
carcinosarcoma | 4.69e-07 | 2 |