FFCP PHASE1:Hg19::chr2:189871161..189871181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189871161..189871181,- | |||
|coexpression_cluster_id=C1051 | |||
|description=CAGE_peak_at_chr2:189871161..189871181,- | |description=CAGE_peak_at_chr2:189871161..189871181,- | ||
|id=chr2:189871161..189871181,- | |id=chr2:189871161..189871181,- | ||
|ontology_enrichment_celltype=CL:0000055!3.35e-26!180;CL:0000057!2.18e-20!75;CL:0000048!7.12e-14!430;CL:0000723!4.73e-13!436;CL:0000183!6.99e-13!59;CL:0000187!2.18e-12!54;CL:0000034!5.27e-12!444;CL:0000680!9.36e-12!57;CL:0000056!9.36e-12!57;CL:0000355!9.36e-12!57;CL:0000393!5.72e-10!60;CL:0000211!5.72e-10!60;CL:0000192!1.29e-08!42;CL:0000514!1.29e-08!42;CL:0002320!2.76e-08!365;CL:0000136!3.47e-08!15;CL:0002334!8.45e-08!12;CL:0002620!1.34e-07!23;CL:0000499!1.93e-07!27;CL:0000134!7.03e-07!358 | |ontology_enrichment_celltype=CL:0000055!3.35e-26!180;CL:0000057!2.18e-20!75;CL:0000048!7.12e-14!430;CL:0000723!4.73e-13!436;CL:0000183!6.99e-13!59;CL:0000187!2.18e-12!54;CL:0000034!5.27e-12!444;CL:0000680!9.36e-12!57;CL:0000056!9.36e-12!57;CL:0000355!9.36e-12!57;CL:0000393!5.72e-10!60;CL:0000211!5.72e-10!60;CL:0000192!1.29e-08!42;CL:0000514!1.29e-08!42;CL:0002320!2.76e-08!365;CL:0000136!3.47e-08!15;CL:0002334!8.45e-08!12;CL:0002620!1.34e-07!23;CL:0000499!1.93e-07!27;CL:0000134!7.03e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.46e-10;13!CL:0002334;1.22e-09;12!CL:0000499;2.32e-09;28!CL:0000134;1.71e-07;55!CL:0000048;3.61e-07;58!CL:0000723;6.61e-07;61!CL:0002570;7.26e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.04e-12,76;CL:0000136,1.88e-12,15;CL:0000048,6.53e-11,427;CL:0000723,1.90e-10,433;CL:0000034,7.52e-10,441;CL:0002334,2.09e-09,12;CL:0000499,2.77e-09,28;CL:0002320,1.04e-08,361;CL:0000134,2.09e-07,354;CL:0002570,7.49e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.37e-07!14 | |ontology_enrichment_disease=DOID:2394!8.37e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.35e-13!70;UBERON:0000914!1.23e-12!83;UBERON:0002329!1.23e-12!83;UBERON:0003077!1.23e-12!83;UBERON:0003059!1.23e-12!83;UBERON:0007282!1.23e-12!83;UBERON:0009618!1.23e-12!83;UBERON:0007285!1.23e-12!83;UBERON:0001134!4.62e-12!61;UBERON:0002036!4.62e-12!61;UBERON:0003082!4.62e-12!61;UBERON:0002385!7.20e-12!63;UBERON:0001015!7.20e-12!63;UBERON:0000383!7.20e-12!63;UBERON:0000486!1.37e-10!82;UBERON:0002384!8.35e-09!375;UBERON:0005256!1.98e-08!143;UBERON:0001013!3.34e-07!14;UBERON:0000478!6.62e-07!24;UBERON:0002199!6.85e-07!45;UBERON:0002416!6.85e-07!45 | |ontology_enrichment_uberon=UBERON:0004290!4.35e-13!70;UBERON:0000914!1.23e-12!83;UBERON:0002329!1.23e-12!83;UBERON:0003077!1.23e-12!83;UBERON:0003059!1.23e-12!83;UBERON:0007282!1.23e-12!83;UBERON:0009618!1.23e-12!83;UBERON:0007285!1.23e-12!83;UBERON:0001134!4.62e-12!61;UBERON:0002036!4.62e-12!61;UBERON:0003082!4.62e-12!61;UBERON:0002385!7.20e-12!63;UBERON:0001015!7.20e-12!63;UBERON:0000383!7.20e-12!63;UBERON:0000486!1.37e-10!82;UBERON:0002384!8.35e-09!375;UBERON:0005256!1.98e-08!143;UBERON:0001013!3.34e-07!14;UBERON:0000478!6.62e-07!24;UBERON:0002199!6.85e-07!45;UBERON:0002416!6.85e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.18e-12;14!UBERON:0003688;1.13e-07;6!UBERON:0002358;1.13e-07;6!UBERON:0003684;1.13e-07;6!UBERON:0001178;1.13e-07;6!UBERON:0004457;6.34e-07;9!UBERON:0000042;6.34e-07;9!UBERON:0002384;8.02e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.69e-12,14;UBERON:0002384,6.53e-09,371;UBERON:0003688,1.48e-07,6;UBERON:0002358,1.48e-07,6;UBERON:0003684,1.48e-07,6;UBERON:0001178,1.48e-07,6 | |||
|phase1_expression=4.36028110249336,4.06790995392868,3.24195129420734,2.00146596706261,7.15137751083661,6.97870819280295,7.59899634504932,2.52687949370732,1.56711376919903,0,0,0.655324116390517,1.84636884759917,1.48519623552056,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.895037932904712,1.0843174571537,4.51204119572301,3.33146993609895,0.795285947051099,8.75942766544745,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,3.47880366186723,1.01304409331664,1.45650098894541,5.16305917347865,1.41867352879343,1.12135520028461,2.1349799145941,0,0.311211035399766,0.942974704487816,0.490385709340376,0.908144565869588,4.03323147135999,0,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.206651562351531,1.18800285728205,1.23633464639278,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0,0.919463387397059,0.600952235626387,0.680593098960126,0.358779271377724,1.49490172172997,2.54318281391474,1.80054657650641,0.206105058476878,2.06112432036503,0.744467425326359,0.675105328965065,0.194874010322397,1.7670364197088,1.74894807420369,1.13152239773168,0.710019185033229,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,1.16344544182,0,0,0.797814349754612,2.08014873822732,0.514414748524284,0,0.266422179016099,3.57444984145369,9.76718889704597,0.823240336780769,1.62868092146868,6.39705507736582,0,7.83742380354924,0,2.69927076191554,0,0,0,4.55287225434007,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,3.50119364741774,0.542530047399471,2.07970861530807,1.07057393278297,0.788512075169673,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0.921845842708516,0.781952530212746,1.17480694477644,1.71571711905428,0,0,0,0.909382714338778,0,2.41912234663744,2.48107807818777,1.07423381301644,5.05188169979532,2.56278298511402,0,3.05622450172854,1.48418066444991,0.308419387605311,2.48586415438378,0.574890092096664,1.03850885836724,1.04589340613963,0,0,0,2.06666006696292,4.18809686415449,4.327105693661,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.870036464629098,0.616194468458578,0.921022048356777,0.413509717453592,0.859361958946189,2.17525040871343,0.340906509664404,4.98579399621729,0,0,0,0,0,3.46293581513704,0.6970372701606,2.15623506123262,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0,3.24071329670502,0.255897791311334,0.42793898803392,0.636406495851874,0.78494864019923,1.97859703341646,2.74537029736055,2.82749765629647,0.202182481573316,0,0,0.48763373908959,1.94970791705028,1.05650146756755,1.36499911407986,7.63589332550049,3.39024349860728,1.10273068709225,0,0.876901770507525,0.578775534266688,1.31178950409327,0.405820753925408,0,0.563391205064483,1.57752487424457,2.75097314836739,0,0,0.633322905892992,3.29294892959902,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78178808499583,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0.957003479195758,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,3.66618086960175,0,0,0,0,0.802577647298789,0,0,0,0,0,6.04953580243319,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,4.06765333404958,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0.399358000997982,0,0,0.268733889946905,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,1.62899880526114,1.72844298240254,0.979762080328227,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38807684618998,2.33713309847224,2.21922344601045,0.378806010550178,2.0125432140206,0.889811221596536,0,3.17584939902802,2.02068360757615,1.33069634990671,0.955780602982214,0.899606224327209,1.08684069813382,0.414706207840855,2.39257543102195,0.521745061811734,13.3729272007524,3.42724690951916,0.406870733204662,1.09109195521536,0.966695013382396,0,0.796191777397232,0.400027764663154,1.37358282073117,2.02049693259551,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0.617602894321944,1.75427239662966,0,0,0.168942440653073,0,0,0,0,0,0,0,0.982829546539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| ||
|short_description=p@chr2:189871161..189871181,- | |short_description=p@chr2:189871161..189871181,- | ||
}} | }} |
Latest revision as of 04:16, 29 July 2015
Short description: | p@chr2:189871161..189871181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189871161..189871181, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.04e-12 | 76 |
fat cell | 1.88e-12 | 15 |
multi fate stem cell | 6.53e-11 | 427 |
somatic stem cell | 1.90e-10 | 433 |
stem cell | 7.52e-10 | 441 |
preadipocyte | 2.09e-09 | 12 |
stromal cell | 2.77e-09 | 28 |
connective tissue cell | 1.04e-08 | 361 |
mesenchymal cell | 2.09e-07 | 354 |
mesenchymal stem cell of adipose | 7.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.69e-12 | 14 |
connective tissue | 6.53e-09 | 371 |
omentum | 1.48e-07 | 6 |
peritoneum | 1.48e-07 | 6 |
abdominal cavity | 1.48e-07 | 6 |
visceral peritoneum | 1.48e-07 | 6 |