FFCP PHASE1:Hg19::chr2:189992577..189992580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189992577..189992580,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_at_chr2:189992577..189992580,- | |description=CAGE_peak_at_chr2:189992577..189992580,- | ||
|id=chr2:189992577..189992580,- | |id=chr2:189992577..189992580,- | ||
|ontology_enrichment_celltype=CL:1000487!4.70e-09!2;CL:1000415!7.49e-09!2 | |ontology_enrichment_celltype=CL:1000487!4.70e-09!2;CL:1000415!7.49e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.59e-30;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.20e-25,11;CL:0000375,6.20e-25,11;CL:0000335,6.20e-25,11 | |||
|ontology_enrichment_development_v019=CL:0000335;6.20e-25;11!UBERON:0009847;2.62e-23;3!UBERON:0003353;2.62e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002367!3.34e-13!11;UBERON:0010147!3.34e-13!11;UBERON:0009846!3.34e-13!11;UBERON:0003353!3.34e-13!11;UBERON:0004902!3.34e-13!11;UBERON:0003820!3.34e-13!11;UBERON:0009847!3.34e-13!11;UBERON:0003937!3.73e-12!12;UBERON:0005399!3.73e-12!12;UBERON:0000162!1.67e-10!14;UBERON:0001353!1.67e-10!14;UBERON:0000163!1.67e-10!14;UBERON:0006866!1.67e-10!14;UBERON:0000164!1.67e-10!14;UBERON:0000931!1.67e-10!14;UBERON:0004122!7.67e-10!15;UBERON:0001046!6.94e-08!19;UBERON:0005153!6.26e-07!37;UBERON:0003101!7.03e-07!22;UBERON:0000079!7.03e-07!22 | |ontology_enrichment_uberon=UBERON:0002367!3.34e-13!11;UBERON:0010147!3.34e-13!11;UBERON:0009846!3.34e-13!11;UBERON:0003353!3.34e-13!11;UBERON:0004902!3.34e-13!11;UBERON:0003820!3.34e-13!11;UBERON:0009847!3.34e-13!11;UBERON:0003937!3.73e-12!12;UBERON:0005399!3.73e-12!12;UBERON:0000162!1.67e-10!14;UBERON:0001353!1.67e-10!14;UBERON:0000163!1.67e-10!14;UBERON:0006866!1.67e-10!14;UBERON:0000164!1.67e-10!14;UBERON:0000931!1.67e-10!14;UBERON:0004122!7.67e-10!15;UBERON:0001046!6.94e-08!19;UBERON:0005153!6.26e-07!37;UBERON:0003101!7.03e-07!22;UBERON:0000079!7.03e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;9.75e-16;18!UBERON:0004765;2.91e-11;26!UBERON:0001434;1.30e-08;36!UBERON:0002367;2.32e-07;11!UBERON:0010147;2.32e-07;11!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12 | |||
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|short_description=p@chr2:189992577..189992580,- | |short_description=p@chr2:189992577..189992580,- | ||
}} | }} |
Latest revision as of 04:18, 29 July 2015
Short description: | p@chr2:189992577..189992580, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189992577..189992580, - |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.20e-25 | 11 |
osteoprogenitor cell | 6.20e-25 | 11 |
mesenchyme condensation cell | 6.20e-25 | 11 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |