FFCP PHASE1:Hg19::chr14:24584138..24584192,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24584138..24584192,-
|short_description=p2@NRL
|description=CAGE_peak_2_at_NRL_5end
|association_with_transcript=26bp_to_ENST00000558280_5end
|EntrezGene...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4901 | |EntrezGene=4901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8002 | |HGNC=8002 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000558280_5end | |||
|cluster_id=chr14:24584138..24584192,- | |||
|description=CAGE_peak_2_at_NRL_5end | |||
|id=chr14:24584138..24584192,- | |||
|ontology_enrichment_celltype=CL:0000738!1.72e-13!140;CL:0000037!4.61e-13!172;CL:0000566!4.61e-13!172;CL:0000988!1.10e-11!182;CL:0002087!5.73e-11!119;CL:0002032!9.61e-11!165;CL:0000837!9.61e-11!165;CL:0002031!1.09e-09!124;CL:0000542!7.71e-08!53;CL:0000051!7.71e-08!53;CL:0000838!9.99e-08!52;CL:0002057!4.16e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.43e-13,136;CL:0000037,5.52e-11,168;CL:0000988,3.05e-10,177;CL:0002087,1.61e-09,115;CL:0002032,2.81e-08,161;CL:0000837,2.81e-08,161;CL:0002031,4.44e-08,120;CL:0000094,1.51e-07,8;CL:0000624,4.34e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-14!115;UBERON:0001049!8.10e-09!57;UBERON:0005068!8.10e-09!57;UBERON:0006241!8.10e-09!57;UBERON:0007135!8.10e-09!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.88e-10,114 | |||
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| ||
|short_description=p2@NRL | |||
}} | }} |
Latest revision as of 13:11, 19 September 2015
Short description: | p2@NRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRL_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000558280_5end |
EntrezGene: | NRL |
HGNC: | 8002 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.43e-13 | 136 |
hematopoietic stem cell | 5.52e-11 | 168 |
hematopoietic cell | 3.05e-10 | 177 |
nongranular leukocyte | 1.61e-09 | 115 |
hematopoietic oligopotent progenitor cell | 2.81e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 4.44e-08 | 120 |
granulocyte | 1.51e-07 | 8 |
CD4-positive, alpha-beta T cell | 4.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.88e-10 | 114 |