FFCP PHASE1:Hg19::chr2:208104288..208104304,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000440326_5end | |association_with_transcript=-69bp_to_ENST00000440326_5end | ||
|cluster_id=chr2:208104288..208104304,+ | |||
|coexpression_cluster_id=C1890 | |||
|description=CAGE_peak_4_at_ENST00000440326_5end | |description=CAGE_peak_4_at_ENST00000440326_5end | ||
|id=chr2:208104288..208104304,+ | |id=chr2:208104288..208104304,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.00e-15!679;CL:0000004!1.00e-15!679;CL:0000255!1.00e-15!679;CL:0000144!1.47e-15!625;CL:0000012!2.30e-15!682;CL:0000055!4.89e-13!180;CL:0002371!5.65e-13!591;CL:0000220!6.29e-11!246;CL:0000003!7.20e-11!722;CL:0002321!1.25e-10!248;CL:0000057!3.00e-09!75;CL:0002076!1.29e-08!43;CL:0002334!9.26e-08!12;CL:0000063!3.31e-07!578;CL:0002368!3.51e-07!13 | |ontology_enrichment_celltype=CL:0000548!1.00e-15!679;CL:0000004!1.00e-15!679;CL:0000255!1.00e-15!679;CL:0000144!1.47e-15!625;CL:0000012!2.30e-15!682;CL:0000055!4.89e-13!180;CL:0002371!5.65e-13!591;CL:0000220!6.29e-11!246;CL:0000003!7.20e-11!722;CL:0002321!1.25e-10!248;CL:0000057!3.00e-09!75;CL:0002076!1.29e-08!43;CL:0002334!9.26e-08!12;CL:0000063!3.31e-07!578;CL:0002368!3.51e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.52e-08;13!CL:0002334;1.79e-08;12!CL:0002615;4.72e-08;3!CL:0002621;1.06e-07;3!CL:0002580;2.35e-07;3!CL:0002159;2.42e-07;14!CL:0002202;8.42e-07;9!CL:0002632;8.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,7.51e-09,13;CL:0002334,3.03e-08,12;CL:0002615,4.82e-08,3;CL:0002621,1.94e-07,3;CL:0002159,2.34e-07,14;CL:0002580,3.52e-07,3;CL:0002076,5.70e-07,42;CL:0002202,5.71e-07,9;CL:0002632,5.71e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.56e-10!14 | |ontology_enrichment_disease=DOID:2394!1.56e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.80e-15;14!DOID:120;3.82e-08;27!DOID:193;1.99e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.88e-15,14;DOID:120,3.18e-08,27;DOID:193,1.68e-07,29 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.36e-10;6!UBERON:0002358;8.36e-10;6!UBERON:0003684;8.36e-10;6!UBERON:0001178;8.36e-10;6!UBERON:0000486;2.90e-09;12!UBERON:0000365;1.46e-08;5!UBERON:0001949;1.06e-07;3!UBERON:0002118;1.11e-07;5!UBERON:0005910;4.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-09,6;UBERON:0002358,1.14e-09,6;UBERON:0003684,1.14e-09,6;UBERON:0001178,1.14e-09,6;UBERON:0000365,1.18e-08,5;UBERON:0002118,1.25e-07,5;UBERON:0001949,1.94e-07,3;UBERON:0000076,2.37e-07,8;UBERON:0005910,3.42e-07,6 | |||
|phase1_expression=2.18014055124668,2.5692062866918,1.40954404095971,2.00146596706261,2.68176656656373,0,0,2.52687949370732,0,1.72013755551056,0.697801167972428,0,0,0.123766352960047,0.662794751455832,0,0,0,0.487932798790507,0.738726348460727,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,2.409647350226,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.00267582127178,0.144846518960824,0.795285947051099,0,0.378139268656271,0.443458794925128,0.614843499851882,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.379891534993739,3.04541115870403,0.286836620748814,0,0,2.1349799145941,0.98667019366864,0,0.67355336034844,0.326923806226917,0.151357427644931,0,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,3.64064544775211,2.15585442544872,0,0,0,0.438977620880838,0.30648779579902,0,0.794025282120147,1.07633781413317,0.640672166455702,0.423863802319124,0.600182192168805,0.515262646192195,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.552299391853796,0,0.355009592516614,0.10075209822764,0,1.35282597214308,1.09098448236334,2.00763216772303,0,0,0,0,0,0,0,0,0,0.928735856063958,3.60939740834793,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,4.20725321410337,0.8231480226628,0,0,0,0,0,0,1.3725424823882,2.30475599358114,1.1240175325762,1.3068766413512,1.29623823221941,0,0,1.44331342025273,0,1.17408694235822,0,0,0,0,0,0,0,0,0,1.17587489739202,1.98485136139341,3.04498977189684,2.90633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0,0.51336800074665,0.517086863031111,0,3.381211010224,0.26593811658487,0,0,0,0.266422179016099,0,0,0,5.86325131728723,0.355391948742546,0.791951872933429,3.61727252471503,3.48613383440118,0.899756920638513,0,0,0,0.479249710983165,0,0,0.579125226670317,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.415941723061614,0.178428988797162,0.157702415033935,0.468565659970853,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,1.07423381301644,1.12264037773229,1.02511319404561,1.53512174720011,0.160853921143607,2.96836132889982,0.462629081407967,0.710246901252508,0.0821271560138091,1.03850885836724,0,0,1.80455823272956,0.644566922551274,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.366277859273374,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0.616194468458578,0.767518373630648,0.964856007391714,2.57808587683857,0.725083469571143,1.02271952899321,0.890320356467374,1.98341898433174,0.960950336825531,3.70076866234294,0.50578890427775,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,0,1.61885211824983,0.823611089208164,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,2.31510213706675,0.655894752046633,0,0,0,0.430234056612155,0.491245205065606,0.7133421029625,0.354761064070598,0,0,0,0,3.1753297199419,4.02181365321472,0,0,4.3050537267123,3.36942951335251,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,1.24415835064723,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,1.74118413160805,0.17472666824203,0,0,0,0,0,0,0,1.78154502040776,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.597019211547496,1.16856654923612,2.21922344601045,0,1.0062716070103,1.77962244319307,0.228840068396924,0.604923695052956,0.15543720058278,0.147855149989634,0.318593534327405,2.24901556081802,1.39736661188633,0.414706207840855,2.12673371646396,1.5652351854352,1.35231848097497,1.90402606084398,1.22061219961398,0.727394636810238,1.18151612746737,2.32016879939247,1.59238355479446,0.800055529326307,0.343395705182793,0,1.26184898228651,0,0,0,0,1.62065732026684,0.489473409012935,1.79088841081487,0,0.219284049578707,3.00371548107998,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0,0,0.699397538597222,4.35454082023081,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,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|phase1_expression=2.18014055124668,2.5692062866918,1.40954404095971,2.00146596706261,2.68176656656373,0,0,2.52687949370732,0,1.72013755551056,0.697801167972428,0,0,0.123766352960047,0.662794751455832,0,0,0,0.487932798790507,0.738726348460727,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,2.409647350226,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.00267582127178,0.144846518960824,0.795285947051099,0,0.378139268656271,0.443458794925128,0.614843499851882,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.379891534993739,3.04541115870403,0.286836620748814,0,0,2.1349799145941,0.98667019366864,0,0.67355336034844,0.326923806226917,0.151357427644931,0,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,3.64064544775211,2.15585442544872,0,0,0,0.438977620880838,0.30648779579902,0,0.794025282120147,1.07633781413317,0.640672166455702,0.423863802319124,0.600182192168805,0.515262646192195,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.552299391853796,0,0.355009592516614,0.10075209822764,0,1.35282597214308,1.09098448236334,2.00763216772303,0,0,0,0,0,0,0,0,0,0.928735856063958,3.60939740834793,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,4.20725321410337,0.8231480226628,0,0,0,0,0,0,1.3725424823882,2.30475599358114,1.1240175325762,1.3068766413512,1.29623823221941,0,0,1.44331342025273,0,1.17408694235822,0,0,0,0,0,0,0,0,0,1.17587489739202,1.98485136139341,3.04498977189684,2.90633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0,0.51336800074665,0.517086863031111,0,3.381211010224,0.26593811658487,0,0,0,0.266422179016099,0,0,0,5.86325131728723,0.355391948742546,0.791951872933429,3.61727252471503,3.48613383440118,0.899756920638513,0,0,0,0.479249710983165,0,0,0.579125226670317,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.415941723061614,0.178428988797162,0.157702415033935,0.468565659970853,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,1.07423381301644,1.12264037773229,1.02511319404561,1.53512174720011,0.160853921143607,2.96836132889982,0.462629081407967,0.710246901252508,0.0821271560138091,1.03850885836724,0,0,1.80455823272956,0.644566922551274,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.366277859273374,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0.616194468458578,0.767518373630648,0.964856007391714,2.57808587683857,0.725083469571143,1.02271952899321,0.890320356467374,1.98341898433174,0.960950336825531,3.70076866234294,0.50578890427775,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,0,1.61885211824983,0.823611089208164,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,2.31510213706675,0.655894752046633,0,0,0,0.430234056612155,0.491245205065606,0.7133421029625,0.354761064070598,0,0,0,0,3.1753297199419,4.02181365321472,0,0,4.3050537267123,3.36942951335251,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,1.24415835064723,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,1.74118413160805,0.17472666824203,0,0,0,0,0,0,0,1.78154502040776,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.597019211547496,1.16856654923612,2.21922344601045,0,1.0062716070103,1.77962244319307,0.228840068396924,0.604923695052956,0.15543720058278,0.147855149989634,0.318593534327405,2.24901556081802,1.39736661188633,0.414706207840855,2.12673371646396,1.5652351854352,1.35231848097497,1.90402606084398,1.22061219961398,0.727394636810238,1.18151612746737,2.32016879939247,1.59238355479446,0.800055529326307,0.343395705182793,0,1.26184898228651,0,0,0,0,1.62065732026684,0.489473409012935,1.79088841081487,0,0.219284049578707,3.00371548107998,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0,0,0.699397538597222,4.35454082023081,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,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| ||
|short_description=p4@ENST00000440326 | |short_description=p4@ENST00000440326 | ||
}} | }} |
Latest revision as of 05:27, 29 July 2015
Short description: | p4@ENST00000440326 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000440326_5end |
Coexpression cluster: | C1890_Small_nasal_Mammary_Urothelial_Keratinocyte_squamous_oral |
Association with transcript: | -69bp_to_ENST00000440326_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 7.51e-09 | 13 |
preadipocyte | 3.03e-08 | 12 |
adipocyte of omentum tissue | 4.82e-08 | 3 |
gingival epithelial cell | 1.94e-07 | 3 |
general ecto-epithelial cell | 2.34e-07 | 14 |
preadipocyte of the breast | 3.52e-07 | 3 |
endo-epithelial cell | 5.70e-07 | 42 |
epithelial cell of tracheobronchial tree | 5.71e-07 | 9 |
epithelial cell of lower respiratory tract | 5.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.14e-09 | 6 |
peritoneum | 1.14e-09 | 6 |
abdominal cavity | 1.14e-09 | 6 |
visceral peritoneum | 1.14e-09 | 6 |
urothelium | 1.18e-08 | 5 |
right ovary | 1.25e-07 | 5 |
gingival epithelium | 1.94e-07 | 3 |
external ectoderm | 2.37e-07 | 8 |
transitional epithelium | 3.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.88e-15 | 14 |
female reproductive organ cancer | 3.18e-08 | 27 |
reproductive organ cancer | 1.68e-07 | 29 |