FFCP PHASE1:Hg19::chr2:220252530..220252548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23549 | |EntrezGene=23549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2981 | |HGNC=2981 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULA0 | |UniProt=Q9ULA0 | ||
|association_with_transcript=0bp_to_ENST00000523527,uc002vlf.1_5end | |association_with_transcript=0bp_to_ENST00000523527,uc002vlf.1_5end | ||
|cluster_id=chr2:220252530..220252548,- | |||
|description=CAGE_peak_3_at_DNPEP_5end | |description=CAGE_peak_3_at_DNPEP_5end | ||
|id=chr2:220252530..220252548,- | |id=chr2:220252530..220252548,- | ||
|ontology_enrichment_celltype=CL:0000144!5.42e-13!625;CL:0002371!1.17e-11!591;CL:0000012!2.42e-11!682;CL:0000548!4.67e-11!679;CL:0000004!4.67e-11!679;CL:0000255!4.67e-11!679;CL:0000222!8.60e-11!119;CL:0002321!1.90e-09!248;CL:0000220!3.87e-09!246;CL:0000055!7.24e-09!180 | |ontology_enrichment_celltype=CL:0000144!5.42e-13!625;CL:0002371!1.17e-11!591;CL:0000012!2.42e-11!682;CL:0000548!4.67e-11!679;CL:0000004!4.67e-11!679;CL:0000255!4.67e-11!679;CL:0000222!8.60e-11!119;CL:0002321!1.90e-09!248;CL:0000220!3.87e-09!246;CL:0000055!7.24e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.09e-11,121;CL:0002321,9.28e-10,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.27e-11!143;UBERON:0002100!6.85e-09!216;UBERON:0000490!8.97e-09!138;UBERON:0000486!6.21e-08!82;UBERON:0000914!1.86e-07!83;UBERON:0002329!1.86e-07!83;UBERON:0003077!1.86e-07!83;UBERON:0003059!1.86e-07!83;UBERON:0007282!1.86e-07!83;UBERON:0009618!1.86e-07!83;UBERON:0007285!1.86e-07!83;UBERON:0004290!2.48e-07!70;UBERON:0003914!4.38e-07!118;UBERON:0003104!9.45e-07!238;UBERON:0009142!9.45e-07!238 | |ontology_enrichment_uberon=UBERON:0005256!3.27e-11!143;UBERON:0002100!6.85e-09!216;UBERON:0000490!8.97e-09!138;UBERON:0000486!6.21e-08!82;UBERON:0000914!1.86e-07!83;UBERON:0002329!1.86e-07!83;UBERON:0003077!1.86e-07!83;UBERON:0003059!1.86e-07!83;UBERON:0007282!1.86e-07!83;UBERON:0009618!1.86e-07!83;UBERON:0007285!1.86e-07!83;UBERON:0004290!2.48e-07!70;UBERON:0003914!4.38e-07!118;UBERON:0003104!9.45e-07!238;UBERON:0009142!9.45e-07!238 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,9.05e-12,122;UBERON:0003104,4.92e-11,160;UBERON:0009142,4.92e-11,160;UBERON:0000490,7.17e-11,148;UBERON:0007503,1.40e-09,78;UBERON:0002100,5.55e-09,199;UBERON:0000486,1.71e-08,83;UBERON:0002329,5.15e-08,71;UBERON:0003059,5.15e-08,71;UBERON:0007282,5.15e-08,71;UBERON:0004290,5.15e-08,71;UBERON:0009618,5.15e-08,71;UBERON:0007524,1.02e-07,73;UBERON:0003077,1.37e-07,72;UBERON:0007285,1.37e-07,72;UBERON:0003914,3.67e-07,117 | |||
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| ||
|short_description=p3@DNPEP | |short_description=p3@DNPEP | ||
}} | }} |
Latest revision as of 20:32, 24 September 2015
Short description: | p3@DNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523527, uc002vlf.1_5end |
EntrezGene: | DNPEP |
HGNC: | 2981 |
UniProt: | Q9ULA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.09e-11 | 121 |
embryonic cell | 9.28e-10 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 9.05e-12 | 122 |
mesenchyme | 4.92e-11 | 160 |
entire embryonic mesenchyme | 4.92e-11 | 160 |
unilaminar epithelium | 7.17e-11 | 148 |
epithelial vesicle | 1.40e-09 | 78 |
trunk | 5.55e-09 | 199 |
multilaminar epithelium | 1.71e-08 | 83 |
somite | 5.15e-08 | 71 |
presomitic mesoderm | 5.15e-08 | 71 |
presumptive segmental plate | 5.15e-08 | 71 |
dermomyotome | 5.15e-08 | 71 |
trunk paraxial mesoderm | 5.15e-08 | 71 |
dense mesenchyme tissue | 1.02e-07 | 73 |
paraxial mesoderm | 1.37e-07 | 72 |
presumptive paraxial mesoderm | 1.37e-07 | 72 |
epithelial tube | 3.67e-07 | 117 |