FFCP PHASE1:Hg19::chr2:30864614..30864621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_AK023269_5end | |association_with_transcript=141bp_to_AK023269_5end | ||
|cluster_id=chr2:30864614..30864621,+ | |||
|description=CAGE_peak_29_at_LCLAT1_5end | |description=CAGE_peak_29_at_LCLAT1_5end | ||
|id=chr2:30864614..30864621,+ | |id=chr2:30864614..30864621,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.66e-21;5!CL:0002321;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.06e-09!235;DOID:14566!8.51e-09!239;DOID:0050687!8.83e-09!143;DOID:0050686!2.94e-08!137;DOID:305!4.47e-07!106;DOID:4556!4.73e-07!3 | |ontology_enrichment_disease=DOID:162!4.06e-09!235;DOID:14566!8.51e-09!239;DOID:0050687!8.83e-09!143;DOID:0050686!2.94e-08!137;DOID:305!4.47e-07!106;DOID:4556!4.73e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:169;8.34e-18;6!DOID:171;2.87e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.66e-21;5!UBERON:0002410;4.66e-21;5!UBERON:0000010;2.31e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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| ||
|short_description=p29@LCLAT1 | |short_description=p29@LCLAT1 | ||
}} | }} |
Latest revision as of 22:17, 16 September 2015
Short description: | p29@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_LCLAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 141bp_to_AK023269_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |