FFCP PHASE1:Hg19::chr3:15345887..15345911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:15345887..15345911,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_at_chr3:15345887..15345911,- | |description=CAGE_peak_at_chr3:15345887..15345911,- | ||
|id=chr3:15345887..15345911,- | |id=chr3:15345887..15345911,- | ||
|ontology_enrichment_celltype=CL:0000791!4.45e-39!18;CL:0000789!4.45e-39!18;CL:0002420!4.45e-39!18;CL:0002419!4.45e-39!18;CL:0000790!4.45e-39!18;CL:0000625!1.87e-31!11;CL:0000084!2.63e-30!25;CL:0000827!2.63e-30!25;CL:0000838!6.38e-22!52;CL:0000542!2.16e-21!53;CL:0000051!2.16e-21!53;CL:0002087!8.89e-13!119;CL:0000738!1.17e-11!140;CL:0000623!3.82e-10!3;CL:0000825!3.82e-10!3;CL:0000842!2.33e-09!3;CL:0000898!2.47e-09!3;CL:0002031!5.24e-09!124;CL:0000037!7.47e-09!172;CL:0000566!7.47e-09!172;CL:0000988!5.90e-08!182;CL:0000624!7.93e-08!6;CL:0002032!3.13e-07!165;CL:0000837!3.13e-07!165;CL:0000224!4.17e-07!4;CL:0000893!5.19e-07!2;CL:0002489!5.19e-07!2;CL:0000809!5.19e-07!2;CL:0000808!5.19e-07!2;CL:0000894!5.19e-07!2;CL:0000806!5.19e-07!2;CL:0000807!5.19e-07!2;CL:0000805!5.19e-07!2;CL:0002425!5.19e-07!2;CL:0000815!6.37e-07!2;CL:0000792!6.37e-07!2;CL:0002677!6.37e-07!2 | |ontology_enrichment_celltype=CL:0000791!4.45e-39!18;CL:0000789!4.45e-39!18;CL:0002420!4.45e-39!18;CL:0002419!4.45e-39!18;CL:0000790!4.45e-39!18;CL:0000625!1.87e-31!11;CL:0000084!2.63e-30!25;CL:0000827!2.63e-30!25;CL:0000838!6.38e-22!52;CL:0000542!2.16e-21!53;CL:0000051!2.16e-21!53;CL:0002087!8.89e-13!119;CL:0000738!1.17e-11!140;CL:0000623!3.82e-10!3;CL:0000825!3.82e-10!3;CL:0000842!2.33e-09!3;CL:0000898!2.47e-09!3;CL:0002031!5.24e-09!124;CL:0000037!7.47e-09!172;CL:0000566!7.47e-09!172;CL:0000988!5.90e-08!182;CL:0000624!7.93e-08!6;CL:0002032!3.13e-07!165;CL:0000837!3.13e-07!165;CL:0000224!4.17e-07!4;CL:0000893!5.19e-07!2;CL:0002489!5.19e-07!2;CL:0000809!5.19e-07!2;CL:0000808!5.19e-07!2;CL:0000894!5.19e-07!2;CL:0000806!5.19e-07!2;CL:0000807!5.19e-07!2;CL:0000805!5.19e-07!2;CL:0002425!5.19e-07!2;CL:0000815!6.37e-07!2;CL:0000792!6.37e-07!2;CL:0002677!6.37e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000625;7.46e-44;11!CL:0000791;1.48e-39;18!CL:0000789;1.48e-39;18!CL:0002419;1.48e-39;18!CL:0000084;6.50e-28;25!CL:0000623;1.57e-19;3!CL:0000542;1.20e-09;53!CL:0000226;7.59e-09;3!CL:0000842;7.59e-09;3!CL:0002127;6.80e-08;1!CL:0000911;6.80e-08;1!CL:0000814;6.80e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.70e-44,11;CL:0000791,1.63e-39,18;CL:0000789,1.63e-39,18;CL:0002420,1.63e-39,18;CL:0002419,1.63e-39,18;CL:0000790,1.63e-39,18;CL:0000084,6.98e-28,25;CL:0000827,6.98e-28,25;CL:0000838,1.72e-20,52;CL:0000542,4.74e-20,53;CL:0000051,4.74e-20,53;CL:0000623,1.90e-19,3;CL:0000825,1.90e-19,3;CL:0002087,2.96e-10,115;CL:0000738,2.05e-09,136;CL:0000226,8.57e-09,3;CL:0000842,8.57e-09,3;CL:0002127,6.59e-08,1;CL:0000914,6.59e-08,1;CL:0000911,6.59e-08,1;CL:0000814,6.59e-08,1;CL:0002042,6.59e-08,1;CL:0002039,6.59e-08,1;CL:0002040,6.59e-08,1;CL:0002041,6.59e-08,1;CL:0002031,3.26e-07,120;CL:0000037,5.47e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.48e-39;18!CL:0000051;1.20e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.14e-22!15;UBERON:0000179!3.14e-22!15;UBERON:0000463!3.14e-22!15;UBERON:0007023!9.27e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.68e-38;15!UBERON:0000179;1.68e-38;15!UBERON:0000463;1.68e-38;15!UBERON:0002390;1.26e-16;32!UBERON:0002193;9.13e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.30e-38,15;UBERON:0000179,1.30e-38,15;UBERON:0000463,1.30e-38,15 | |||
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| ||
|short_description=p@chr3:15345887..15345911,- | |short_description=p@chr3:15345887..15345911,- | ||
}} | }} |
Latest revision as of 17:16, 29 July 2015
Short description: | p@chr3:15345887..15345911, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:15345887..15345911, - |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.70e-44 | 11 |
mature alpha-beta T cell | 1.63e-39 | 18 |
alpha-beta T cell | 1.63e-39 | 18 |
immature T cell | 1.63e-39 | 18 |
mature T cell | 1.63e-39 | 18 |
immature alpha-beta T cell | 1.63e-39 | 18 |
T cell | 6.98e-28 | 25 |
pro-T cell | 6.98e-28 | 25 |
lymphoid lineage restricted progenitor cell | 1.72e-20 | 52 |
lymphocyte | 4.74e-20 | 53 |
common lymphoid progenitor | 4.74e-20 | 53 |
natural killer cell | 1.90e-19 | 3 |
pro-NK cell | 1.90e-19 | 3 |
nongranular leukocyte | 2.96e-10 | 115 |
leukocyte | 2.05e-09 | 136 |
single nucleate cell | 8.57e-09 | 3 |
mononuclear cell | 8.57e-09 | 3 |
innate effector T cell | 6.59e-08 | 1 |
immature NK T cell | 6.59e-08 | 1 |
effector T cell | 6.59e-08 | 1 |
mature NK T cell | 6.59e-08 | 1 |
immature NK T cell stage IV | 6.59e-08 | 1 |
immature NK T cell stage I | 6.59e-08 | 1 |
immature NK T cell stage II | 6.59e-08 | 1 |
immature NK T cell stage III | 6.59e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 3.26e-07 | 120 |
hematopoietic stem cell | 5.47e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 1.30e-38 | 15 |
haemolymphatic fluid | 1.30e-38 | 15 |
organism substance | 1.30e-38 | 15 |