FFCP PHASE1:Hg19::chr5:156390230..156390246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91937 | |EntrezGene=91937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25132 | |HGNC=25132 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCL9 | |UniProt=B5MCL9 | ||
|association_with_transcript=0bp_to_ENST00000407087_5end | |association_with_transcript=0bp_to_ENST00000407087_5end | ||
|cluster_id=chr5:156390230..156390246,- | |||
|description=CAGE_peak_1_at_TIMD4_5end | |description=CAGE_peak_1_at_TIMD4_5end | ||
|id=chr5:156390230..156390246,- | |id=chr5:156390230..156390246,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.07e-13;7!UBERON:0006603;1.12e-09;65!UBERON:0003104;9.70e-08;31!UBERON:0006595;2.20e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-48!115;UBERON:0004921!6.45e-10!129;UBERON:0004185!6.45e-10!129;UBERON:0000062!6.85e-10!511;UBERON:0000481!2.24e-08!347;UBERON:0001007!3.80e-08!155;UBERON:0001555!3.80e-08!155;UBERON:0007026!3.80e-08!155;UBERON:0004119!2.03e-07!169;UBERON:0000925!2.03e-07!169;UBERON:0006595!2.03e-07!169;UBERON:0004151!4.73e-07!3;UBERON:0003978!5.83e-07!3;UBERON:0009751!5.83e-07!3;UBERON:0000946!5.83e-07!3;UBERON:0002523!5.83e-07!3;UBERON:0005983!5.83e-07!3;UBERON:0002165!5.83e-07!3;UBERON:0002062!5.83e-07!3;UBERON:0007280!5.83e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.57e-48!115;UBERON:0004921!6.45e-10!129;UBERON:0004185!6.45e-10!129;UBERON:0000062!6.85e-10!511;UBERON:0000481!2.24e-08!347;UBERON:0001007!3.80e-08!155;UBERON:0001555!3.80e-08!155;UBERON:0007026!3.80e-08!155;UBERON:0004119!2.03e-07!169;UBERON:0000925!2.03e-07!169;UBERON:0006595!2.03e-07!169;UBERON:0004151!4.73e-07!3;UBERON:0003978!5.83e-07!3;UBERON:0009751!5.83e-07!3;UBERON:0000946!5.83e-07!3;UBERON:0002523!5.83e-07!3;UBERON:0005983!5.83e-07!3;UBERON:0002165!5.83e-07!3;UBERON:0002062!5.83e-07!3;UBERON:0007280!5.83e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.84e-14;33!UBERON:0004177;3.55e-13;5!UBERON:0005057;3.55e-13;5!UBERON:0000922;2.95e-10;49!UBERON:0002370;4.25e-09;2!UBERON:0005058;4.25e-09;2!UBERON:0009113;4.25e-09;2!UBERON:0000160;5.08e-09;17!UBERON:0005409;6.51e-09;22!UBERON:0001829;7.57e-09;2!UBERON:0001007;8.51e-09;81!UBERON:0005090;3.37e-08;2!UBERON:0001630;3.37e-08;2!UBERON:0000059;6.38e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.46e-24,114;UBERON:0004921,1.36e-17,118;UBERON:0001007,4.66e-13,145;UBERON:0001555,4.66e-13,145;UBERON:0007026,4.66e-13,145;UBERON:0005409,2.02e-12,25;UBERON:0004119,2.79e-12,160;UBERON:0000925,2.79e-12,160;UBERON:0006595,2.79e-12,160;UBERON:0001041,5.87e-11,87;UBERON:0003408,1.51e-09,10;UBERON:0004177,2.10e-09,7;UBERON:0005057,2.10e-09,7;UBERON:0000160,4.61e-09,17;UBERON:0001829,7.29e-09,2;UBERON:0005090,2.81e-08,2;UBERON:0001630,2.81e-08,2;UBERON:0011216,3.18e-08,223;UBERON:0000059,5.56e-08,11 | |||
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| ||
|short_description=p1@TIMD4 | |short_description=p1@TIMD4 | ||
}} | }} |
Latest revision as of 13:04, 16 September 2015
Short description: | p1@TIMD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIMD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407087_5end |
EntrezGene: | TIMD4 |
HGNC: | 25132 |
UniProt: | B5MCL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.46e-24 | 114 |
subdivision of digestive tract | 1.36e-17 | 118 |
digestive system | 4.66e-13 | 145 |
digestive tract | 4.66e-13 | 145 |
primitive gut | 4.66e-13 | 145 |
gastrointestinal system | 2.02e-12 | 25 |
endoderm-derived structure | 2.79e-12 | 160 |
endoderm | 2.79e-12 | 160 |
presumptive endoderm | 2.79e-12 | 160 |
foregut | 5.87e-11 | 87 |
gland of gut | 1.51e-09 | 10 |
hemopoietic organ | 2.10e-09 | 7 |
immune organ | 2.10e-09 | 7 |
intestine | 4.61e-09 | 17 |
major salivary gland | 7.29e-09 | 2 |
muscle structure | 2.81e-08 | 2 |
muscle organ | 2.81e-08 | 2 |
organ system subdivision | 3.18e-08 | 223 |
large intestine | 5.56e-08 | 11 |