FFCP PHASE1:Hg19::chr15:55562496..55562505,-: Difference between revisions
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|id=chr15:55562496..55562505,-
|short_description=p13@RAB27A
|description=CAGE_peak_13_at_RAB27A_5end
|association_with_transcript=-12bp_to_NM_183234_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5873 | |EntrezGene=5873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9766 | |HGNC=9766 | ||
|TSSclassifier=strong | |||
|UniProt=A2RU94,P51159 | |UniProt=A2RU94,P51159 | ||
|association_with_transcript=-12bp_to_NM_183234_5end | |||
|cluster_id=chr15:55562496..55562505,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_13_at_RAB27A_5end | |||
|id=chr15:55562496..55562505,- | |||
|ontology_enrichment_celltype=CL:0000148!7.69e-35!10;CL:0000541!7.69e-35!10;CL:0000147!1.78e-33!14;CL:0000710!4.46e-23!20;CL:0000075!6.09e-22!27;CL:0000325!5.33e-15!39;CL:0002567!5.37e-14!3;CL:0002077!1.01e-13!33;CL:0002566!2.79e-11!1;CL:0000149!9.99e-11!4;CL:0000333!2.28e-10!41;CL:0000133!3.87e-09!59;CL:0000221!1.80e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.03e-82;10!CL:0000147;7.71e-59;14!CL:0002567;2.97e-44;3!CL:0000710;1.99e-41;20!CL:0002566;2.58e-34;1!CL:0000075;7.09e-31;27!CL:0002077;6.05e-25;34!CL:0000149;1.32e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.03e-82,10;CL:0000541,5.03e-82,10;CL:0000147,7.71e-59,14;CL:0002567,2.97e-44,3;CL:0000710,1.99e-41,20;CL:0002566,2.58e-34,1;CL:0000075,7.10e-31,27;CL:0002077,1.18e-24,34;CL:0000333,1.27e-19,41;CL:0000133,5.41e-14,59;CL:0000221,1.28e-11,72;CL:0000149,1.32e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;9.35e-09;59!CL:0000221;9.44e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!2.05e-20!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;9.07e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000970!9.53e-12!20;UBERON:0002104!3.50e-11!21;UBERON:0002902!1.77e-10!1;UBERON:0009899!1.77e-10!1;UBERON:0000020!3.37e-10!23;UBERON:0001032!9.07e-10!24;UBERON:0004456!9.07e-10!24;UBERON:0000966!1.27e-08!5;UBERON:0005388!1.27e-08!5;UBERON:0001802!1.27e-08!5;UBERON:0007625!2.78e-08!11;UBERON:0000019!3.52e-08!19;UBERON:0000047!3.52e-08!19;UBERON:0004088!3.52e-08!19;UBERON:0003072!3.52e-08!19;UBERON:0003071!3.52e-08!19;UBERON:0004128!3.52e-08!19;UBERON:0001456!2.05e-07!21 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p13@RAB27A | |||
}} | }} |
Latest revision as of 04:02, 18 September 2015
Short description: | p13@RAB27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RAB27A_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -12bp_to_NM_183234_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | A2RU94P51159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.03e-82 | 10 |
melanoblast | 5.03e-82 | 10 |
pigment cell | 7.71e-59 | 14 |
light melanocyte | 2.97e-44 | 3 |
neurecto-epithelial cell | 1.99e-41 | 20 |
dark melanocyte | 2.58e-34 | 1 |
columnar/cuboidal epithelial cell | 7.10e-31 | 27 |
ecto-epithelial cell | 1.18e-24 | 34 |
migratory neural crest cell | 1.27e-19 | 41 |
neurectodermal cell | 5.41e-14 | 59 |
ectodermal cell | 1.28e-11 | 72 |
visual pigment cell | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.07e-18 | 2 |