FFCP PHASE1:Hg19::chr15:68595092..68595106,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:68595092..68595106,-
|short_description=p@chr15:68595092..68595106,-
|description=CAGE_peak_at_chr15:68595092..68595106,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:68595092..68595106,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr15:68595092..68595106,- | |||
|id=chr15:68595092..68595106,- | |||
|ontology_enrichment_celltype=CL:0000055!2.70e-23!180;CL:0000057!1.24e-21!75;CL:0002334!3.99e-11!12;CL:0002620!9.65e-08!23;CL:0000048!1.63e-07!430;CL:0000723!5.94e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.67e-14;23!CL:0002334;6.93e-13;12!CL:0000057;1.69e-09;73!CL:0002320;8.13e-08;188!CL:0002580;1.38e-07;3!CL:0000153;1.50e-07;9!CL:0000447;1.50e-07;9!CL:0002579;1.77e-07;3!CL:0000135;2.11e-07;3!CL:0000388;2.11e-07;3!CL:0000136;3.20e-07;13!CL:0002615;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.27e-28,76;CL:0002620,1.78e-14,23;CL:0002320,6.58e-14,361;CL:0000134,2.86e-13,354;CL:0002334,5.30e-13,12;CL:0000219,1.39e-11,386;CL:0000048,5.78e-11,427;CL:0000723,1.56e-10,433;CL:0000034,5.62e-10,441;CL:0000136,7.18e-10,15;CL:0000153,1.36e-07,9;CL:0000447,1.36e-07,9;CL:0002580,1.39e-07,3;CL:0002579,1.72e-07,3;CL:0000135,2.03e-07,3;CL:0000388,2.03e-07,3;CL:0002615,3.00e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.14e-10;5!DOID:450;1.14e-10;5!DOID:66;1.14e-10;5!DOID:423;1.14e-10;5!DOID:0080000;1.14e-10;5!DOID:11722;1.14e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.01e-10,5;DOID:450,1.01e-10,5;DOID:66,1.01e-10,5;DOID:423,1.01e-10,5;DOID:0080000,1.01e-10,5;DOID:11722,1.01e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.57e-07!6;UBERON:0002358!1.57e-07!6;UBERON:0003684!1.57e-07!6;UBERON:0001178!1.57e-07!6;UBERON:0002384!7.14e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.79e-14;9!UBERON:0000042;1.79e-14;9!UBERON:0003688;4.93e-13;6!UBERON:0002358;4.93e-13;6!UBERON:0003684;4.93e-13;6!UBERON:0001178;4.93e-13;6!UBERON:0007846;2.11e-07;3!UBERON:0000043;2.11e-07;3!UBERON:0007845;2.11e-07;3!UBERON:0002199;4.55e-07;46!UBERON:0002416;4.55e-07;46!UBERON:0002384;5.67e-07;198!UBERON:0002097;7.30e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.57e-14,371;UBERON:0003688,4.42e-13,6;UBERON:0002358,4.42e-13,6;UBERON:0003684,4.42e-13,6;UBERON:0001178,4.42e-13,6;UBERON:0004457,2.03e-10,12;UBERON:0000042,2.03e-10,12;UBERON:0002199,9.05e-10,46;UBERON:0002416,9.05e-10,46;UBERON:0002097,6.88e-09,41;UBERON:0007846,2.03e-07,3;UBERON:0000043,2.03e-07,3;UBERON:0007845,2.03e-07,3 | |||
|phase1_expression=3.08853244759946,25.263861819136,3.80576891059122,22.0161256376887,12.9618717383913,11.3404008133048,7.59899634504932,0,0,0,0,0.218441372130172,0,0,0,3.36162573225888,0,0,0.487932798790507,0.61560529038394,0.408001382488506,2.19418305034661,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,3.97583067623023,2.50668955317945,8.69079113764942,0,4.37971383272372,0,0.443458794925128,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,10.933382937297,1.51956613997496,0.794455084879313,12.333974692199,2.4826786753885,0,2.1349799145941,21.7067442607101,0.311211035399766,0.269421344139376,0.326923806226917,1.36221684880438,2.30470369792,0,0,0,0,0,0,0,0,0.122834317311768,0,0,4.45080472701402,0,0.718618141816238,0,0,0,1.75591048352335,2.14541457059314,1.95309476578576,0.113432183160021,7.5343646989322,13.4541154955697,5.72216133130817,6.90209520994125,4.74041634496819,12.6243864622358,13.4004136558745,4.38818463827292,6.13853132515551,4.54380793639406,4.05019554026117,1.13152239773168,27.6907482162959,5.23910910783729,0.67824236924195,0,0,0,0,0,0,0,0,0,0,14.1513006402435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.70445216541493,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.80672114403045,2.32689088364,0,0,3.19125739901845,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,1.2162378064119,0,2.10833939483032,6.9491208092559,9.18895486672911,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0.271265023699736,2.28767947683888,6.60187258549499,5.83498935625558,3.86566669475954,2.40756879782175,0,0,7.3064815838898,2.39679919104214,0,2.15381273209015,2.40200396667599,0,0,0,0,0,0,7.44323423456331,23.0192959932094,41.818354070528,6.66323576129645,13.816095724801,36.5138400995989,7.42090332224955,0.308419387605311,1.9531789784444,0.328508624055237,2.59627214591811,0.464841513839837,0,0,0,0.803701137152247,0.364182336013434,0.262248829918848,0,0,0,0,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.773365746336976,0,0,0,0,0,0,3.56128142586949,0,0,0,0,1.39453664789186,11.6480568327337,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,3.95935209470396,0,0,1.32687795048244,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0,0,10.3442741295855,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,2.78947183551498,0,0,0.715880777515084,0,2.79935628895627,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,4.32979812218605,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,1.39781334593624,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0.418411385249333,0.305994652908965,0.866851769704557,0,0,0,1.71906176567983,0,0.558564802544508,0.916641696046735,0,0,1.28767814440971,0,0.0671834724867263,12.6104959239841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0,0.681552087141687,0.79318464064088,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,1.17632909849086,0,0,0,2.10341978862502,0,0.947015026375446,2.26411111577318,0,0.228840068396924,0.604923695052956,0,0,0.159296767163702,0.449803112163605,0,1.24411862352257,2.92425886013794,1.04349012362347,1.95334891696384,0.761610424337591,1.62748293281865,0.727394636810238,1.07410557042488,0,1.59238355479446,2.40016658797892,5.15093557774189,3.36749488765919,1.26184898228651,0,0,0,0.453411851024545,0,0,0.71635536432595,0,0.438568099157414,0.176689145945881,0,0.506827321959218,0,0,0,0.138258436151731,0,0,0,5.56936743038901,0,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0.123935764259002,0,3.18004350653419,0,0,0.705351887381368,3.6749457282384,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0,0,11.8228449594822,0,0.198916222116275,0.150420656698515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| ||
|short_description=p@chr15:68595092..68595106,- | |||
}} | }} |
Latest revision as of 03:42, 25 July 2015
Short description: | p@chr15:68595092..68595106, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68595092..68595106, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.27e-28 | 76 |
skin fibroblast | 1.78e-14 | 23 |
connective tissue cell | 6.58e-14 | 361 |
mesenchymal cell | 2.86e-13 | 354 |
preadipocyte | 5.30e-13 | 12 |
motile cell | 1.39e-11 | 386 |
multi fate stem cell | 5.78e-11 | 427 |
somatic stem cell | 1.56e-10 | 433 |
stem cell | 5.62e-10 | 441 |
fat cell | 7.18e-10 | 15 |
GAG secreting cell | 1.36e-07 | 9 |
carbohydrate secreting cell | 1.36e-07 | 9 |
preadipocyte of the breast | 1.39e-07 | 3 |
omentum preadipocyte | 1.72e-07 | 3 |
fibrocyte | 2.03e-07 | 3 |
tendon cell | 2.03e-07 | 3 |
adipocyte of omentum tissue | 3.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.57e-14 | 371 |
omentum | 4.42e-13 | 6 |
peritoneum | 4.42e-13 | 6 |
abdominal cavity | 4.42e-13 | 6 |
visceral peritoneum | 4.42e-13 | 6 |
cavity lining | 2.03e-10 | 12 |
serous membrane | 2.03e-10 | 12 |
integument | 9.05e-10 | 46 |
integumental system | 9.05e-10 | 46 |
skin of body | 6.88e-09 | 41 |
dense regular connective tissue | 2.03e-07 | 3 |
tendon | 2.03e-07 | 3 |
regular connective tissue | 2.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.01e-10 | 5 |
myotonic disease | 1.01e-10 | 5 |
muscle tissue disease | 1.01e-10 | 5 |
myopathy | 1.01e-10 | 5 |
muscular disease | 1.01e-10 | 5 |
myotonic dystrophy | 1.01e-10 | 5 |