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FFCP PHASE1:Hg19::chr8:101728009..101728028,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=26986
|EntrezGene=26986
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=8554
|HGNC=8554
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-180bp_to_ENST00000519596_5end
|association_with_transcript=-180bp_to_ENST00000519596_5end
|cluster_id=chr8:101728009..101728028,-
|coexpression_cluster_id=C22
|description=CAGE_peak_24_at_PABPC1_5end
|description=CAGE_peak_24_at_PABPC1_5end
|id=chr8:101728009..101728028,-
|id=chr8:101728009..101728028,-
|ontology_enrichment_celltype=CL:0000037!3.82e-15!172;CL:0000566!3.82e-15!172;CL:0000988!3.47e-14!182;CL:0002087!7.07e-13!119;CL:0002032!2.19e-12!165;CL:0000837!2.19e-12!165;CL:0000738!1.42e-11!140;CL:0000542!2.50e-09!53;CL:0000051!2.50e-09!53;CL:0002031!6.93e-09!124;CL:0000838!1.06e-08!52;CL:0000624!5.59e-08!6
|ontology_enrichment_celltype=CL:0000037!3.82e-15!172;CL:0000566!3.82e-15!172;CL:0000988!3.47e-14!182;CL:0002087!7.07e-13!119;CL:0002032!2.19e-12!165;CL:0000837!2.19e-12!165;CL:0000738!1.42e-11!140;CL:0000542!2.50e-09!53;CL:0000051!2.50e-09!53;CL:0002031!6.93e-09!124;CL:0000838!1.06e-08!52;CL:0000624!5.59e-08!6
|ontology_enrichment_celltype_v019=CL:0000623;2.26e-21;3!CL:0000624;2.58e-19;6!CL:0000791;1.25e-18;18!CL:0000789;1.25e-18;18!CL:0002419;1.25e-18;18!CL:0000084;3.74e-17;25!CL:0000542;1.35e-14;53
|ontology_enrichment_celltype_v019_2=CL:0000838,6.54e-24,52;CL:0000542,2.08e-23,53;CL:0000051,2.08e-23,53;CL:0000623,6.66e-22,3;CL:0000825,6.66e-22,3;CL:0000624,1.62e-19,6;CL:0000791,9.50e-19,18;CL:0000789,9.50e-19,18;CL:0002420,9.50e-19,18;CL:0002419,9.50e-19,18;CL:0000790,9.50e-19,18;CL:0000084,3.16e-17,25;CL:0000827,3.16e-17,25;CL:0000738,1.02e-14,136;CL:0002087,4.30e-14,115;CL:0002031,1.06e-11,120;CL:0000037,3.16e-11,168;CL:0000988,1.80e-10,177;CL:0002032,3.84e-09,161;CL:0000837,3.84e-09,161
|ontology_enrichment_development_v019=CL:0000790;1.25e-18;18!CL:0000051;1.35e-14;53
|ontology_enrichment_disease=DOID:162!4.51e-12!235;DOID:14566!4.54e-12!239;DOID:2531!3.72e-08!51;DOID:0060083!3.72e-08!51;DOID:0050686!1.89e-07!137;DOID:1240!2.35e-07!39;DOID:0050687!7.56e-07!143
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|short_description=p24@PABPC1
|short_description=p24@PABPC1
}}
}}

Latest revision as of 20:10, 24 September 2015

Short description:p24@PABPC1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_24_at_PABPC1_5end
Coexpression cluster:C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19
Association with transcript: -180bp_to_ENST00000519596_5end
EntrezGene:PABPC1
HGNC: 8554
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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