FFCP PHASE1:Hg19::chr16:19429067..19429073,+: Difference between revisions
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|id=chr16:19429067..19429073,+
|short_description=p18@TMC5
|description=CAGE_peak_18_at_TMC5_5end
|association_with_transcript=49bp_to_ENST00000542583,uc010var.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79838 | |EntrezGene=79838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |HGNC=22999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000542583,uc010var.1_5end | |||
|cluster_id=chr16:19429067..19429073,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_18_at_TMC5_5end | |||
|id=chr16:19429067..19429073,+ | |||
|ontology_enrichment_celltype=CL:0000167!2.16e-09!1;CL:0000164!2.16e-09!1;CL:0000502!2.16e-09!1;CL:0000172!2.16e-09!1;CL:0000173!2.16e-09!1;CL:0002351!2.16e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.03e-10;29 | |||
|ontology_enrichment_disease=DOID:3493!1.37e-17!2;DOID:3111!1.69e-09!1;DOID:3603!1.69e-09!1;DOID:4430!2.16e-09!1;DOID:299!6.49e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.96e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.49e-17!2;UBERON:0003127!2.65e-17!2;UBERON:0002294!1.01e-10!7;UBERON:0001173!1.01e-10!7;UBERON:0004912!1.01e-10!7;UBERON:0001736!2.55e-09!1;UBERON:0006298!2.55e-09!1;UBERON:0001301!3.00e-09!1;UBERON:0004913!3.53e-09!1;UBERON:0003703!3.53e-09!1;UBERON:0001174!3.53e-09!1;UBERON:0004914!3.53e-09!1;UBERON:0001154!3.83e-09!1;UBERON:0001153!3.83e-09!1;UBERON:0002394!1.08e-08!4;UBERON:0003928!1.08e-08!4;UBERON:0004921!4.92e-08!129;UBERON:0004185!4.92e-08!129;UBERON:0005409!1.61e-07!35;UBERON:0001007!1.71e-07!155;UBERON:0001555!1.71e-07!155;UBERON:0007026!1.71e-07!155;UBERON:0000160!6.03e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.61e-34;2!UBERON:0003126;8.16e-11;7!UBERON:0001005;8.16e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.61e-34,2;UBERON:0003126,8.16e-11,7;UBERON:0001005,8.16e-11,7;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38 | |||
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|short_description=p18@TMC5 | |||
}} | }} |
Latest revision as of 23:48, 24 September 2015
Short description: | p18@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TMC5_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 49bp_to_ENST00000542583, uc010var.1_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.61e-34 | 2 |
trachea | 8.16e-11 | 7 |
respiratory airway | 8.16e-11 | 7 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.05e-34 | 2 |