FFCP PHASE1:Hg19::chrX:110653832..110653846,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1641 | |EntrezGene=1641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2714 | |HGNC=2714 | ||
|TSSclassifier=strong | |||
|UniProt=O43602 | |UniProt=O43602 | ||
|association_with_transcript=-206bp_to_AF034634,CU693320_5end | |association_with_transcript=-206bp_to_AF034634,CU693320_5end | ||
|cluster_id=chrX:110653832..110653846,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_DCX_5end | |description=CAGE_peak_6_at_DCX_5end | ||
|id=chrX:110653832..110653846,- | |id=chrX:110653832..110653846,- | ||
|ontology_enrichment_celltype=CL:0000047!1.10e-20!8;CL:0000242!6.20e-14!2;CL:0002319!3.81e-11!25;CL:0000540!1.11e-10!6;CL:0000031!1.11e-10!6;CL:0000404!1.11e-10!6;CL:0000167!5.33e-08!1;CL:0000164!5.33e-08!1;CL:0000502!5.33e-08!1;CL:0000172!5.33e-08!1;CL:0000173!5.33e-08!1;CL:0002351!5.33e-08!1 | |ontology_enrichment_celltype=CL:0000047!1.10e-20!8;CL:0000242!6.20e-14!2;CL:0002319!3.81e-11!25;CL:0000540!1.11e-10!6;CL:0000031!1.11e-10!6;CL:0000404!1.11e-10!6;CL:0000167!5.33e-08!1;CL:0000164!5.33e-08!1;CL:0000502!5.33e-08!1;CL:0000172!5.33e-08!1;CL:0000173!5.33e-08!1;CL:0002351!5.33e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.97e-23;6!CL:0000404;1.97e-23;6!CL:0000167;2.43e-16;1!CL:0000164;2.43e-16;1!CL:0000502;2.43e-16;1!CL:0000172;2.43e-16;1!CL:0000173;2.43e-16;1!CL:0002319;2.33e-09;25!CL:0000047;4.89e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.15e-31,8;CL:0000540,1.97e-23,6;CL:0000031,1.97e-23,6;CL:0000404,1.97e-23,6;CL:0000167,2.25e-16,1;CL:0000164,2.25e-16,1;CL:0000502,2.25e-16,1;CL:0000172,2.25e-16,1;CL:0000173,2.25e-16,1;CL:0002351,2.25e-16,1;CL:0002319,2.30e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.97e-23;6!CL:0002351;2.43e-16;1 | |||
|ontology_enrichment_disease=DOID:171!4.23e-16!10;DOID:3095!4.37e-10!22;DOID:2994!4.37e-10!22;DOID:4430!5.33e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.43e-16;1!DOID:171;6.12e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.25e-16,1;DOID:171,6.12e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-14!82;UBERON:0000073!5.41e-14!94;UBERON:0001016!5.41e-14!94;UBERON:0005743!1.11e-13!86;UBERON:0000924!1.72e-13!173;UBERON:0006601!1.72e-13!173;UBERON:0002619!4.63e-13!22;UBERON:0000956!1.86e-11!25;UBERON:0000203!1.86e-11!25;UBERON:0001869!2.12e-11!32;UBERON:0002791!4.96e-11!33;UBERON:0002020!1.10e-10!34;UBERON:0003528!1.10e-10!34;UBERON:0001893!1.10e-10!34;UBERON:0001950!1.13e-10!20;UBERON:0004121!8.41e-10!169;UBERON:0002346!2.14e-09!90;UBERON:0002780!1.03e-08!41;UBERON:0001890!1.03e-08!41;UBERON:0006240!1.03e-08!41;UBERON:0003080!1.74e-08!42;UBERON:0001049!1.39e-07!57;UBERON:0005068!1.39e-07!57;UBERON:0006241!1.39e-07!57;UBERON:0007135!1.39e-07!57;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0003056!5.68e-07!61 | |ontology_enrichment_uberon=UBERON:0001017!1.78e-14!82;UBERON:0000073!5.41e-14!94;UBERON:0001016!5.41e-14!94;UBERON:0005743!1.11e-13!86;UBERON:0000924!1.72e-13!173;UBERON:0006601!1.72e-13!173;UBERON:0002619!4.63e-13!22;UBERON:0000956!1.86e-11!25;UBERON:0000203!1.86e-11!25;UBERON:0001869!2.12e-11!32;UBERON:0002791!4.96e-11!33;UBERON:0002020!1.10e-10!34;UBERON:0003528!1.10e-10!34;UBERON:0001893!1.10e-10!34;UBERON:0001950!1.13e-10!20;UBERON:0004121!8.41e-10!169;UBERON:0002346!2.14e-09!90;UBERON:0002780!1.03e-08!41;UBERON:0001890!1.03e-08!41;UBERON:0006240!1.03e-08!41;UBERON:0003080!1.74e-08!42;UBERON:0001049!1.39e-07!57;UBERON:0005068!1.39e-07!57;UBERON:0006241!1.39e-07!57;UBERON:0007135!1.39e-07!57;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0003056!5.68e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.34e-12;49!UBERON:0001950;2.85e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.98e-11,81;UBERON:0001016,4.38e-10,89;UBERON:0001950,2.88e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,2.31986643833309,3.18280904135263,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,9.98068990005971,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03967351750127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0,0,0,0.509197589862076,1.06287460050841,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,10.3349395450904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4864709893826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,1.41405928260976,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,8.29066311646717,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,2.31986643833309,3.18280904135263,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,9.98068990005971,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03967351750127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0,0,0,0.509197589862076,1.06287460050841,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,10.3349395450904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4864709893826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,1.41405928260976,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,8.29066311646717,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@DCX | |short_description=p6@DCX | ||
}} | }} |
Latest revision as of 01:44, 19 September 2015
Short description: | p6@DCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DCX_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -206bp_to_AF034634, CU693320_5end |
EntrezGene: | DCX |
HGNC: | 2714 |
UniProt: | O43602 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.15e-31 | 8 |
neuron | 1.97e-23 | 6 |
neuroblast | 1.97e-23 | 6 |
electrically signaling cell | 1.97e-23 | 6 |
peptide hormone secreting cell | 2.25e-16 | 1 |
enteroendocrine cell | 2.25e-16 | 1 |
type D enteroendocrine cell | 2.25e-16 | 1 |
somatostatin secreting cell | 2.25e-16 | 1 |
pancreatic D cell | 2.25e-16 | 1 |
progenitor cell of endocrine pancreas | 2.25e-16 | 1 |
neural cell | 2.30e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.98e-11 | 81 |
nervous system | 4.38e-10 | 89 |
neocortex | 2.88e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.25e-16 | 1 |
neuroectodermal tumor | 6.12e-07 | 10 |