FFCP PHASE1:Hg19::chr5:14292946..14292955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt=O75962 | |UniProt=O75962 | ||
|association_with_transcript=-165bp_to_uc003jfh.1_5end | |association_with_transcript=-165bp_to_uc003jfh.1_5end | ||
|cluster_id=chr5:14292946..14292955,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_47_at_TRIO_5end | |description=CAGE_peak_47_at_TRIO_5end | ||
|id=chr5:14292946..14292955,+ | |id=chr5:14292946..14292955,+ | ||
|ontology_enrichment_celltype=CL:0002274!6.45e-51!5;CL:0000457!6.45e-51!5;CL:0002191!6.45e-51!5;CL:0000097!6.45e-51!5;CL:0000831!6.45e-51!5;CL:0002028!6.45e-51!5;CL:0000163!9.98e-29!9;CL:0000151!6.01e-08!35;CL:0000243!1.02e-07!15;CL:0000125!1.02e-07!15;CL:0000030!1.02e-07!15;CL:0000339!1.02e-07!15;CL:0000095!5.34e-07!17;CL:0000123!5.34e-07!17 | |ontology_enrichment_celltype=CL:0002274!6.45e-51!5;CL:0000457!6.45e-51!5;CL:0002191!6.45e-51!5;CL:0000097!6.45e-51!5;CL:0000831!6.45e-51!5;CL:0002028!6.45e-51!5;CL:0000163!9.98e-29!9;CL:0000151!6.01e-08!35;CL:0000243!1.02e-07!15;CL:0000125!1.02e-07!15;CL:0000030!1.02e-07!15;CL:0000339!1.02e-07!15;CL:0000095!5.34e-07!17;CL:0000123!5.34e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.22e-16;15!CL:0000125;1.22e-16;15!CL:0000095;5.09e-15;17!CL:0000097;1.71e-14;5!CL:0002319;6.40e-11;25!CL:0000163;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.17e-16,15;CL:0000125,1.17e-16,15;CL:0000030,1.17e-16,15;CL:0000339,1.17e-16,15;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0000097,1.83e-14,5;CL:0002028,1.83e-14,5;CL:0002319,6.25e-11,25;CL:0000163,1.21e-08,9;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.16e-25;10!UBERON:0003056;3.66e-23;3!CL:0000339;1.22e-16;15 | |||
|ontology_enrichment_disease=DOID:3093!1.53e-10!11;DOID:5409!2.26e-08!4 | |ontology_enrichment_disease=DOID:3093!1.53e-10!11;DOID:5409!2.26e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:3093;4.86e-23;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.59e-23,11 | |||
|ontology_enrichment_uberon=UBERON:0001896!8.99e-11!3;UBERON:0005290!8.99e-11!3;UBERON:0010096!8.99e-11!3;UBERON:0000966!5.08e-07!5;UBERON:0005388!5.08e-07!5;UBERON:0001802!5.08e-07!5 | |ontology_enrichment_uberon=UBERON:0001896!8.99e-11!3;UBERON:0005290!8.99e-11!3;UBERON:0010096!8.99e-11!3;UBERON:0000966!5.08e-07!5;UBERON:0005388!5.08e-07!5;UBERON:0001802!5.08e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6 | |||
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|short_description=p47@TRIO | |short_description=p47@TRIO | ||
}} | }} |
Latest revision as of 07:42, 25 September 2015
Short description: | p47@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_TRIO_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -165bp_to_uc003jfh.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | O75962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.17e-16 | 15 |
glial cell | 1.17e-16 | 15 |
glioblast | 1.17e-16 | 15 |
glioblast (sensu Vertebrata) | 1.17e-16 | 15 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
mast cell | 1.83e-14 | 5 |
basophil mast progenitor cell | 1.83e-14 | 5 |
neural cell | 6.25e-11 | 25 |
endocrine cell | 1.21e-08 | 9 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.59e-23 | 11 |