FFCP PHASE1:Hg19::chrX:7137535..7137546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=412 | |EntrezGene=412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11425 | |HGNC=11425 | ||
|TSSclassifier=strong | |||
|UniProt=P08842 | |UniProt=P08842 | ||
|association_with_transcript=38bp_to_ENST00000217961_5end | |association_with_transcript=38bp_to_ENST00000217961_5end | ||
|cluster_id=chrX:7137535..7137546,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_5_at_STS_5end | |description=CAGE_peak_5_at_STS_5end | ||
|id=chrX:7137535..7137546,+ | |id=chrX:7137535..7137546,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.39e-14!7;CL:0000586!3.39e-14!7;CL:0002541!4.60e-09!3;CL:0000819!2.84e-07!1;CL:0002563!5.05e-07!4 | |ontology_enrichment_celltype=CL:0000039!3.39e-14!7;CL:0000586!3.39e-14!7;CL:0002541!4.60e-09!3;CL:0000819!2.84e-07!1;CL:0002563!5.05e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.66e-24;7!CL:0000586;5.66e-24;7!CL:0002253;2.49e-10;2!CL:0002541;3.06e-07;3!CL:0002231;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.66e-24,7;CL:0000586,5.66e-24,7;CL:0002253,2.49e-10,2;CL:0002231,2.79e-07,3;CL:0002541,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.95e-20;1!UBERON:0008425;4.28e-19;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.01e-09!10;DOID:0060073!2.84e-07!1;DOID:8675!2.84e-07!1;DOID:4960!3.02e-07!1;DOID:0070004!3.02e-07!1;DOID:1799!3.21e-07!1;DOID:10165!3.21e-07!1;DOID:1798!3.21e-07!1;DOID:5093!6.22e-07!4;DOID:1612!6.22e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.55e-08;22!DOID:2994;4.55e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.55e-08,22;DOID:2994,4.55e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.03e-10!14;UBERON:0000158!1.03e-10!14;UBERON:0001950!3.23e-09!20;UBERON:0000476!4.60e-09!3;UBERON:0000920!4.60e-09!3;UBERON:0003124!1.72e-08!7;UBERON:0002619!2.27e-08!22;UBERON:0000956!2.41e-07!25;UBERON:0000203!2.41e-07!25;UBERON:0002020!4.01e-07!34;UBERON:0003528!4.01e-07!34;UBERON:0002022!4.89e-07!1;UBERON:0001242!5.05e-07!4;UBERON:0001262!5.05e-07!4;UBERON:0004786!5.05e-07!4;UBERON:0004808!5.05e-07!4;UBERON:0001277!5.05e-07!4;UBERON:0002902!6.57e-07!1;UBERON:0009899!6.57e-07!1;UBERON:0002581!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0005631!1.03e-10!14;UBERON:0000158!1.03e-10!14;UBERON:0001950!3.23e-09!20;UBERON:0000476!4.60e-09!3;UBERON:0000920!4.60e-09!3;UBERON:0003124!1.72e-08!7;UBERON:0002619!2.27e-08!22;UBERON:0000956!2.41e-07!25;UBERON:0000203!2.41e-07!25;UBERON:0002020!4.01e-07!34;UBERON:0003528!4.01e-07!34;UBERON:0002022!4.89e-07!1;UBERON:0001242!5.05e-07!4;UBERON:0001262!5.05e-07!4;UBERON:0004786!5.05e-07!4;UBERON:0004808!5.05e-07!4;UBERON:0001277!5.05e-07!4;UBERON:0002902!6.57e-07!1;UBERON:0009899!6.57e-07!1;UBERON:0002581!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.06e-07;3!UBERON:0000920;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.69e-11,7;UBERON:0000920,3.35e-07,3 | |||
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|short_description=p5@STS | |short_description=p5@STS | ||
}} | }} |
Latest revision as of 08:08, 16 September 2015
Short description: | p5@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STS_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 38bp_to_ENST00000217961_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | P08842 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.66e-24 | 7 |
germ cell | 5.66e-24 | 7 |
epithelial cell of large intestine | 2.49e-10 | 2 |
epithelial cell of prostate | 2.79e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.69e-11 | 7 |
egg chorion | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.55e-08 | 22 |
germ cell cancer | 4.55e-08 | 22 |