FFCP PHASE1:Hg19::chr16:53479662..53479672,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:53479662..53479672,+
|short_description=p13@RBL2
|description=CAGE_peak_13_at_RBL2_5end
|association_with_transcript=-20bp_to_ENST00000379935,uc002ehj.2_5...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5934 | |EntrezGene=5934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |HGNC=9894 | ||
|TSSclassifier=strong | |||
|UniProt=E9PG04 | |UniProt=E9PG04 | ||
|association_with_transcript=-20bp_to_ENST00000379935,uc002ehj.2_5end | |||
|cluster_id=chr16:53479662..53479672,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_13_at_RBL2_5end | |||
|id=chr16:53479662..53479672,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.31e-38!18;CL:0000789!4.31e-38!18;CL:0002420!4.31e-38!18;CL:0002419!4.31e-38!18;CL:0000790!4.31e-38!18;CL:0000625!4.37e-31!11;CL:0000084!1.82e-29!25;CL:0000827!1.82e-29!25;CL:0000838!9.37e-17!52;CL:0000542!2.46e-16!53;CL:0000051!2.46e-16!53;CL:0002087!8.15e-13!119;CL:0000738!9.30e-13!140;CL:0000624!1.43e-11!6;CL:0002031!4.37e-09!124;CL:0000842!5.49e-09!3;CL:0000037!7.01e-09!172;CL:0000566!7.01e-09!172;CL:0000623!1.20e-08!3;CL:0000825!1.20e-08!3;CL:0000988!5.74e-08!182;CL:0002032!2.62e-07!165;CL:0000837!2.62e-07!165;CL:0000224!7.97e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.08e-52;11!CL:0000791;3.56e-40;18!CL:0000789;3.56e-40;18!CL:0002419;3.56e-40;18!CL:0000084;1.32e-28;25!CL:0000895;8.53e-11;1!CL:0000542;1.55e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.39e-52,11;CL:0000791,2.64e-40,18;CL:0000789,2.64e-40,18;CL:0002420,2.64e-40,18;CL:0002419,2.64e-40,18;CL:0000790,2.64e-40,18;CL:0000084,1.07e-28,25;CL:0000827,1.07e-28,25;CL:0000838,3.25e-16,52;CL:0000542,7.01e-16,53;CL:0000051,7.01e-16,53;CL:0000810,8.14e-11,1;CL:0000895,8.14e-11,1;CL:0002436,8.14e-11,1;CL:0002427,8.14e-11,1;CL:0002428,8.14e-11,1;CL:0002429,8.14e-11,1;CL:0002433,8.14e-11,1;CL:0002431,8.14e-11,1;CL:0002432,8.14e-11,1;CL:0000738,1.02e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.56e-40;18!CL:0002427;8.53e-11;1!CL:0000051;1.55e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.73e-14!15;UBERON:0000179!7.73e-14!15;UBERON:0000463!7.73e-14!15;UBERON:0007023!1.26e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.00e-09;15!UBERON:0000179;1.00e-09;15!UBERON:0000463;1.00e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-09,15;UBERON:0000179,1.10e-09,15;UBERON:0000463,1.10e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,3.0706351847777,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,1.22551502573691,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0,0.822189523018381,0,1.15921234294021,0,0,0,3.28597093822942,4.98186641682498,3.09264700934367,4.04831507231205,2.86708872891687,3.90650072313851,4.75226022224187,0.752875595388864,2.17577238962511,4.99722906209383,3.78843603270427,6.56902397536837,2.82249440514625,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,0.569647187174163,0,0.411362273086194,1.29694662238543,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,3.0706351847777,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,1.22551502573691,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0,0.822189523018381,0,1.15921234294021,0,0,0,3.28597093822942,4.98186641682498,3.09264700934367,4.04831507231205,2.86708872891687,3.90650072313851,4.75226022224187,0.752875595388864,2.17577238962511,4.99722906209383,3.78843603270427,6.56902397536837,2.82249440514625,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,0.569647187174163,0,0.411362273086194,1.29694662238543,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p13@RBL2 | |||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p13@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RBL2_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -20bp_to_ENST00000379935, uc002ehj.2_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | E9PG04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.39e-52 | 11 |
mature alpha-beta T cell | 2.64e-40 | 18 |
alpha-beta T cell | 2.64e-40 | 18 |
immature T cell | 2.64e-40 | 18 |
mature T cell | 2.64e-40 | 18 |
immature alpha-beta T cell | 2.64e-40 | 18 |
T cell | 1.07e-28 | 25 |
pro-T cell | 1.07e-28 | 25 |
lymphoid lineage restricted progenitor cell | 3.25e-16 | 52 |
lymphocyte | 7.01e-16 | 53 |
common lymphoid progenitor | 7.01e-16 | 53 |
CD4-positive, alpha-beta thymocyte | 8.14e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.14e-11 | 1 |
mature CD4 single-positive thymocyte | 8.14e-11 | 1 |
resting double-positive thymocyte | 8.14e-11 | 1 |
double-positive blast | 8.14e-11 | 1 |
CD69-positive double-positive thymocyte | 8.14e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.14e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.14e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.14e-11 | 1 |
leukocyte | 1.02e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-09 | 15 |
haemolymphatic fluid | 1.10e-09 | 15 |
organism substance | 1.10e-09 | 15 |