FFCP PHASE1:Hg19::chr16:58035535..58035538,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:58035535..58035538,+
|short_description=p@chr16:58035535..58035538,+
|description=CAGE_peak_at_chr16:58035535..58035538,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:58035535..58035538,+ | |||
|description=CAGE_peak_at_chr16:58035535..58035538,+ | |||
|id=chr16:58035535..58035538,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.23e-17;9!CL:0002632;5.23e-17;9!CL:0002368;1.92e-15;13!CL:0002328;8.83e-14;3!CL:0000307;5.41e-07;3!CL:0002569;6.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.26e-17,9;CL:0002632,4.26e-17,9;CL:0002368,2.41e-15,13;CL:0002328,4.41e-14,3;CL:0000068,5.60e-07,3;CL:0000069,5.60e-07,3;CL:0000307,5.60e-07,3;CL:0000377,5.60e-07,3;CL:0002569,6.22e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;5.41e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.83e-14;3!UBERON:0002031;8.83e-14;3!UBERON:0007196;6.25e-10;15!UBERON:0001558;6.25e-10;15!UBERON:0002185;1.95e-08;5!UBERON:0003422;6.84e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.41e-14,3;UBERON:0002031,4.41e-14,3;UBERON:0007196,5.55e-10,15;UBERON:0001558,5.55e-10,15;UBERON:0002185,1.30e-08,5;UBERON:0002329,2.91e-08,71;UBERON:0003059,2.91e-08,71;UBERON:0007282,2.91e-08,71;UBERON:0004290,2.91e-08,71;UBERON:0009618,2.91e-08,71;UBERON:0003077,4.17e-08,72;UBERON:0007285,4.17e-08,72;UBERON:0007524,5.89e-08,73;UBERON:0000485,7.38e-08,9;UBERON:0007503,2.91e-07,78;UBERON:0001134,4.24e-07,62;UBERON:0002036,4.24e-07,62;UBERON:0003082,4.24e-07,62;UBERON:0003422,6.22e-07,6;UBERON:0002385,8.35e-07,64;UBERON:0001015,8.35e-07,64;UBERON:0000383,8.35e-07,64 | |||
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| ||
|short_description=p@chr16:58035535..58035538,+ | |||
}} | }} |
Latest revision as of 05:25, 17 September 2015
Short description: | p@chr16:58035535..58035538, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:58035535..58035538, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.26e-17 | 9 |
epithelial cell of lower respiratory tract | 4.26e-17 | 9 |
respiratory epithelial cell | 2.41e-15 | 13 |
bronchial epithelial cell | 4.41e-14 | 3 |
duct epithelial cell | 5.60e-07 | 3 |
branched duct epithelial cell | 5.60e-07 | 3 |
tracheal epithelial cell | 5.60e-07 | 3 |
tracheoblast | 5.60e-07 | 3 |
mesenchymal stem cell of umbilical cord | 6.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.41e-14 | 3 |
epithelium of bronchus | 4.41e-14 | 3 |
tracheobronchial tree | 5.55e-10 | 15 |
lower respiratory tract | 5.55e-10 | 15 |
bronchus | 1.30e-08 | 5 |
somite | 2.91e-08 | 71 |
presomitic mesoderm | 2.91e-08 | 71 |
presumptive segmental plate | 2.91e-08 | 71 |
dermomyotome | 2.91e-08 | 71 |
trunk paraxial mesoderm | 2.91e-08 | 71 |
paraxial mesoderm | 4.17e-08 | 72 |
presumptive paraxial mesoderm | 4.17e-08 | 72 |
dense mesenchyme tissue | 5.89e-08 | 73 |
simple columnar epithelium | 7.38e-08 | 9 |
epithelial vesicle | 2.91e-07 | 78 |
skeletal muscle tissue | 4.24e-07 | 62 |
striated muscle tissue | 4.24e-07 | 62 |
myotome | 4.24e-07 | 62 |
mesenchyme of umbilical cord | 6.22e-07 | 6 |
muscle tissue | 8.35e-07 | 64 |
musculature | 8.35e-07 | 64 |
musculature of body | 8.35e-07 | 64 |