FFCP PHASE1:Hg19::chr7:142498988..142499010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:142498988..142499010,- | |||
|coexpression_cluster_id=C1420 | |||
|description=CAGE_peak_at_chr7:142498988..142499010,- | |description=CAGE_peak_at_chr7:142498988..142499010,- | ||
|id=chr7:142498988..142499010,- | |id=chr7:142498988..142499010,- | ||
|ontology_enrichment_celltype=CL:0000084!6.19e-37!25;CL:0000827!6.19e-37!25;CL:0000542!2.41e-35!53;CL:0000051!2.41e-35!53;CL:0000838!6.88e-34!52;CL:0000791!9.70e-26!18;CL:0000789!9.70e-26!18;CL:0002420!9.70e-26!18;CL:0002419!9.70e-26!18;CL:0000790!9.70e-26!18;CL:0000625!3.41e-17!11;CL:0002087!4.99e-16!119;CL:0000738!1.44e-14!140;CL:0002031!3.28e-11!124;CL:0000988!9.60e-10!182;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000624!1.27e-08!6;CL:0002032!8.38e-08!165;CL:0000837!8.38e-08!165;CL:0000080!1.74e-07!6 | |ontology_enrichment_celltype=CL:0000084!6.19e-37!25;CL:0000827!6.19e-37!25;CL:0000542!2.41e-35!53;CL:0000051!2.41e-35!53;CL:0000838!6.88e-34!52;CL:0000791!9.70e-26!18;CL:0000789!9.70e-26!18;CL:0002420!9.70e-26!18;CL:0002419!9.70e-26!18;CL:0000790!9.70e-26!18;CL:0000625!3.41e-17!11;CL:0002087!4.99e-16!119;CL:0000738!1.44e-14!140;CL:0002031!3.28e-11!124;CL:0000988!9.60e-10!182;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000624!1.27e-08!6;CL:0002032!8.38e-08!165;CL:0000837!8.38e-08!165;CL:0000080!1.74e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.08e-34;18!CL:0000789;2.08e-34;18!CL:0002419;2.08e-34;18!CL:0000084;2.60e-34;25!CL:0000625;2.39e-30;11!CL:0000542;4.41e-14;53!CL:0000624;7.90e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.51e-34,18;CL:0000789,1.51e-34,18;CL:0002420,1.51e-34,18;CL:0002419,1.51e-34,18;CL:0000790,1.51e-34,18;CL:0000084,2.16e-34,25;CL:0000827,2.16e-34,25;CL:0000625,1.98e-30,11;CL:0000838,2.79e-23,52;CL:0000542,8.92e-23,53;CL:0000051,8.92e-23,53;CL:0002087,8.13e-10,115;CL:0000738,5.88e-09,136;CL:0000624,6.92e-09,6;CL:0002031,4.40e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.08e-34;18!CL:0000051;4.41e-14;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.53e-13!15;UBERON:0000179!2.53e-13!15;UBERON:0000463!2.53e-13!15;UBERON:0004177!8.94e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!2.53e-13!15;UBERON:0000179!2.53e-13!15;UBERON:0000463!2.53e-13!15;UBERON:0004177!8.94e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.80e-12;2!UBERON:0005058;1.80e-12;2!UBERON:0009113;1.80e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.79e-07,1 | |||
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| ||
|short_description=p@chr7:142498988..142499010,- | |short_description=p@chr7:142498988..142499010,- | ||
}} | }} |
Latest revision as of 06:59, 31 July 2015
Short description: | p@chr7:142498988..142499010, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:142498988..142499010, - |
Coexpression cluster: | C1420_CD4_acute_Hodgkin_chronic_thymus_CD8_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.51e-34 | 18 |
alpha-beta T cell | 1.51e-34 | 18 |
immature T cell | 1.51e-34 | 18 |
mature T cell | 1.51e-34 | 18 |
immature alpha-beta T cell | 1.51e-34 | 18 |
T cell | 2.16e-34 | 25 |
pro-T cell | 2.16e-34 | 25 |
CD8-positive, alpha-beta T cell | 1.98e-30 | 11 |
lymphoid lineage restricted progenitor cell | 2.79e-23 | 52 |
lymphocyte | 8.92e-23 | 53 |
common lymphoid progenitor | 8.92e-23 | 53 |
nongranular leukocyte | 8.13e-10 | 115 |
leukocyte | 5.88e-09 | 136 |
CD4-positive, alpha-beta T cell | 6.92e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 4.40e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.79e-07 | 1 |