FFCP PHASE1:Hg19::chr11:12398115..12398128,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:12398115..12398128,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr11:12398115..12398128,+ | |description=CAGE_peak_at_chr11:12398115..12398128,+ | ||
|id=chr11:12398115..12398128,+ | |id=chr11:12398115..12398128,+ | ||
|ontology_enrichment_celltype=CL:0000325!1.22e-17!39;CL:0000136!1.49e-14!15;CL:0000147!2.69e-13!14;CL:0000148!6.76e-09!10;CL:0000541!6.76e-09!10;CL:0002334!1.24e-07!12;CL:0000569!1.60e-07!4;CL:0000011!1.60e-07!4;CL:0000149!7.90e-07!4 | |ontology_enrichment_celltype=CL:0000325!1.22e-17!39;CL:0000136!1.49e-14!15;CL:0000147!2.69e-13!14;CL:0000148!6.76e-09!10;CL:0000541!6.76e-09!10;CL:0002334!1.24e-07!12;CL:0000569!1.60e-07!4;CL:0000011!1.60e-07!4;CL:0000149!7.90e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.07e-33;10!CL:0000147;7.67e-24;14!CL:0002567;8.50e-22;3!CL:0000136;4.84e-18;13!CL:0000710;1.95e-16;20!CL:0000075;6.01e-12;27!CL:0002615;6.56e-10;3!CL:0002566;1.77e-08;1!CL:0002077;2.41e-08;34!CL:0002581;7.59e-08;1!CL:0000569;1.93e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.07e-33,10;CL:0000541,1.07e-33,10;CL:0000147,7.69e-24,14;CL:0002567,8.52e-22,3;CL:0000136,6.45e-21,15;CL:0000710,1.96e-16,20;CL:0000075,6.02e-12,27;CL:0000333,1.36e-11,41;CL:0002615,5.01e-10,3;CL:0002077,2.64e-09,34;CL:0002566,1.77e-08,1;CL:0002581,8.12e-08,1;CL:0000133,9.61e-08,59;CL:0000569,1.81e-07,4;CL:0000011,1.81e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.93e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.67e-08!14;UBERON:0003688!2.12e-07!6;UBERON:0002358!2.12e-07!6;UBERON:0003684!2.12e-07!6;UBERON:0001178!2.12e-07!6 | |ontology_enrichment_uberon=UBERON:0001013!1.67e-08!14;UBERON:0003688!2.12e-07!6;UBERON:0002358!2.12e-07!6;UBERON:0003684!2.12e-07!6;UBERON:0001178!2.12e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.39e-11;14!UBERON:0003688;1.53e-10;6!UBERON:0002358;1.53e-10;6!UBERON:0003684;1.53e-10;6!UBERON:0001178;1.53e-10;6!UBERON:0006834;3.70e-08;1!UBERON:0000996;7.59e-08;1!UBERON:0004457;3.50e-07;9!UBERON:0000042;3.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.62e-11,14;UBERON:0003688,1.07e-10,6;UBERON:0002358,1.07e-10,6;UBERON:0003684,1.07e-10,6;UBERON:0001178,1.07e-10,6;UBERON:0006834,3.34e-08,1;UBERON:0000996,4.71e-08,1 | |||
|phase1_expression=0.54503513781167,5.56661362116556,1.9733616573436,3.00219895059391,0.893922188854576,0,0,2.52687949370732,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8142817424099,29.4131087679874,38.6817575793155,27.3715913636328,9.25447434329912,24.3277876853573,59.4518979871603,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.744323423456331,0.920771839728375,0.841980283299221,1.92208723883551,0,0.321707842287215,1.48418066444991,0,0.355123450626254,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,1.43897966066652,0.823611089208164,0.824686816419805,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0027595760908,0.306345576763462,1.63936315354902,0,0,0,0,0,0,0.0620964029413835,0,0,1.51649117541648,0,0,0,0,0.447764408660622,0.701139929541673,1.10961172300523,0.189403005275089,0.754703705257725,0.889811221596536,1.60188047877847,1.51230923763239,0.777186002913902,0.73927574994817,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0.450772826991655,2.28483127301277,0,0,0.751873899297419,0.464033759878494,0,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.717222053926764,0,0,0,0,0,0,2.5670703278402,0,1.99727032255654,0.201273793591026,0 | |phase1_expression=0.54503513781167,5.56661362116556,1.9733616573436,3.00219895059391,0.893922188854576,0,0,2.52687949370732,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8142817424099,29.4131087679874,38.6817575793155,27.3715913636328,9.25447434329912,24.3277876853573,59.4518979871603,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.744323423456331,0.920771839728375,0.841980283299221,1.92208723883551,0,0.321707842287215,1.48418066444991,0,0.355123450626254,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,1.43897966066652,0.823611089208164,0.824686816419805,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0027595760908,0.306345576763462,1.63936315354902,0,0,0,0,0,0,0.0620964029413835,0,0,1.51649117541648,0,0,0,0,0.447764408660622,0.701139929541673,1.10961172300523,0.189403005275089,0.754703705257725,0.889811221596536,1.60188047877847,1.51230923763239,0.777186002913902,0.73927574994817,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0.450772826991655,2.28483127301277,0,0,0.751873899297419,0.464033759878494,0,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.717222053926764,0,0,0,0,0,0,2.5670703278402,0,1.99727032255654,0.201273793591026,0 | ||
|short_description=p@chr11:12398115..12398128,+ | |short_description=p@chr11:12398115..12398128,+ | ||
}} | }} |
Latest revision as of 19:29, 23 July 2015
Short description: | p@chr11:12398115..12398128, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12398115..12398128, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.07e-33 | 10 |
melanoblast | 1.07e-33 | 10 |
pigment cell | 7.69e-24 | 14 |
light melanocyte | 8.52e-22 | 3 |
fat cell | 6.45e-21 | 15 |
neurecto-epithelial cell | 1.96e-16 | 20 |
columnar/cuboidal epithelial cell | 6.02e-12 | 27 |
migratory neural crest cell | 1.36e-11 | 41 |
adipocyte of omentum tissue | 5.01e-10 | 3 |
ecto-epithelial cell | 2.64e-09 | 34 |
dark melanocyte | 1.77e-08 | 1 |
perirenal preadipocyte | 8.12e-08 | 1 |
neurectodermal cell | 9.61e-08 | 59 |
cardiac mesenchymal cell | 1.81e-07 | 4 |
migratory trunk neural crest cell | 1.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.62e-11 | 14 |
omentum | 1.07e-10 | 6 |
peritoneum | 1.07e-10 | 6 |
abdominal cavity | 1.07e-10 | 6 |
visceral peritoneum | 1.07e-10 | 6 |
uterus or analog | 3.34e-08 | 1 |
vagina | 4.71e-08 | 1 |