FFCP PHASE1:Hg19::chr15:89444904..89444930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89444904..89444930,+ | |||
|coexpression_cluster_id=C568 | |||
|description=CAGE_peak_at_chr15:89444904..89444930,+ | |description=CAGE_peak_at_chr15:89444904..89444930,+ | ||
|id=chr15:89444904..89444930,+ | |id=chr15:89444904..89444930,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.12e-16!180;CL:0000057!7.44e-11!75;CL:0002334!1.65e-08!12;CL:0000325!1.31e-07!39;CL:0000499!2.34e-07!27 | |ontology_enrichment_celltype=CL:0000055!1.12e-16!180;CL:0000057!7.44e-11!75;CL:0002334!1.65e-08!12;CL:0000325!1.31e-07!39;CL:0000499!2.34e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.49e-16;13!CL:0002334;3.14e-12;12!CL:0002615;1.67e-09;3!CL:0002521;2.78e-09;3!CL:0000135;5.90e-09;3!CL:0000388;5.90e-09;3!CL:0002580;2.54e-08;3!CL:0002579;2.54e-08;3!CL:0002569;1.88e-07;6!CL:0000499;2.38e-07;28!CL:0000153;4.26e-07;9!CL:0000447;4.26e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.68e-17,15;CL:0002334,3.18e-12,12;CL:0000057,1.61e-10,76;CL:0002615,1.58e-09,3;CL:0002521,3.12e-09,3;CL:0000135,4.56e-09,3;CL:0000388,4.56e-09,3;CL:0000048,1.26e-08,427;CL:0002580,1.88e-08,3;CL:0000723,2.62e-08,433;CL:0002320,2.79e-08,361;CL:0000134,3.68e-08,354;CL:0002579,5.59e-08,3;CL:0000034,6.71e-08,441;CL:0000499,1.58e-07,28;CL:0002569,2.20e-07,6;CL:0000153,3.80e-07,9;CL:0000447,3.80e-07,9;CL:0000219,6.87e-07,386;CL:0002617,9.56e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.01e-07!95 | |ontology_enrichment_uberon=UBERON:0003102!1.01e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.47e-18;9!UBERON:0000042;4.47e-18;9!UBERON:0003688;4.16e-16;6!UBERON:0002358;4.16e-16;6!UBERON:0003684;4.16e-16;6!UBERON:0001178;4.16e-16;6!UBERON:0002190;2.78e-09;3!UBERON:0002072;4.78e-09;5!UBERON:0007846;5.90e-09;3!UBERON:0000043;5.90e-09;3!UBERON:0007845;5.90e-09;3!UBERON:0001013;9.31e-09;14!UBERON:0003422;1.88e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.90e-16,6;UBERON:0002358,8.90e-16,6;UBERON:0003684,8.90e-16,6;UBERON:0001178,8.90e-16,6;UBERON:0004457,5.67e-13,12;UBERON:0000042,5.67e-13,12;UBERON:0002190,3.12e-09,3;UBERON:0002072,4.00e-09,5;UBERON:0007846,4.56e-09,3;UBERON:0000043,4.56e-09,3;UBERON:0007845,4.56e-09,3;UBERON:0001013,1.14e-08,14;UBERON:0002384,2.58e-08,371;UBERON:0002199,5.43e-08,46;UBERON:0002416,5.43e-08,46;UBERON:0003422,2.20e-07,6 | |||
|phase1_expression=7.44881355009282,2.5692062866918,3.80576891059122,6.00439790118782,5.81049422755474,10.4680622892044,7.59899634504932,3.15859936713415,2.35067065379855,0,0,0,1.31883489114227,0.123766352960047,0,0,0,1.46062018077475,0.487932798790507,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,3.50936537445123,2.60723734129483,0,1.45990461090791,0.378139268656271,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,3.47880366186723,0,0.264818361626438,0.286836620748814,0,0,0,1.2333377420858,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,1.18800285728205,2.47266929278557,0,0,0.168336113954066,0,0,0.438977620880838,1.5324389789951,0.901428353439581,0.226864366320042,0.89694817844431,1.70845911054854,0.847727604638247,1.50045548042201,0,2.57640540045629,1.8611685633159,1.5189869901714,0.292311015483596,0.504867548488229,1.10459878370759,0.161646056818812,5.68015348026583,0.604512589365842,0.847802961552438,0.386521706326594,0.272746120590835,0,0.609868530647977,0.265059536642971,0.464775771478074,0.10366105501537,0.504641701751257,1.09493207722749,0,1.28648187638577,0,0.464367928031979,3.60939740834793,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,1.02940686179115,0.329250856225877,0,0,0.185176890317059,0.325808305310325,0,0,0.579652024875384,0,0.866198686566443,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.53735113621709,0,0,0,0,0,0,0,0.190493682876507,1.90994212779139,0,0,0.308482478109971,0,0.571652865261156,0,0.87192013766656,0.1466765716419,2.45616259939778,7.15312891703765,0.845302752556,0.26593811658487,2.08014873822732,0,0,0.532844358032199,1.14382394926518,9.22456729165453,0.823240336780769,0,0.710783897485092,0,2.1100756394171,0.871533458600294,0.399891964728228,0,0,2.10833939483032,1.19812427745791,2.29723871668228,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0.415941723061614,0.178428988797162,0,0.35142424497814,0.300946099727719,0,4.1389228517002,0,0.737476674166813,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,1.81434175997808,3.72161711728165,1.99500565274481,1.12264037773229,1.15325234330131,1.02341449813341,3.05622450172854,1.48418066444991,0.308419387605311,1.59805552781814,0.328508624055237,0.519254429183621,0.116210378459959,0.120859449591622,0.802025881213139,0.0920809889358963,0.459257792658427,0.546273504020151,1.83574180943194,0,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0.0915694648183434,0.41254749960294,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,2.51849877464512,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,2.2875623270859,0.255897791311334,0.42793898803392,0,0,0.719489830333259,0.823611089208164,0.235624804691373,0,0,0,0,0.731140468893853,0,0.409499734223957,0.989838023675989,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,1.57198465620994,1.07001315444375,0.354761064070598,1.47775344708365,2.30506425071931,0,0.699869440489966,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.637705090915289,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0,0,0,1.44701316529778,0,0.211125408127993,2.59022384726391,0,0,0.306806047506464,0,4.0435146396035,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0.569219092059585,0.277349346026277,1.73559738335131,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0.203996435272644,0.866851769704557,0,0,0,0.859530882839914,0,0.558564802544508,0.229160424011684,0,0.199679000498991,1.28767814440971,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0.482259445395058,2.75078873194468,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0.19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|phase1_expression=7.44881355009282,2.5692062866918,3.80576891059122,6.00439790118782,5.81049422755474,10.4680622892044,7.59899634504932,3.15859936713415,2.35067065379855,0,0,0,1.31883489114227,0.123766352960047,0,0,0,1.46062018077475,0.487932798790507,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,3.50936537445123,2.60723734129483,0,1.45990461090791,0.378139268656271,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,3.47880366186723,0,0.264818361626438,0.286836620748814,0,0,0,1.2333377420858,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,1.18800285728205,2.47266929278557,0,0,0.168336113954066,0,0,0.438977620880838,1.5324389789951,0.901428353439581,0.226864366320042,0.89694817844431,1.70845911054854,0.847727604638247,1.50045548042201,0,2.57640540045629,1.8611685633159,1.5189869901714,0.292311015483596,0.504867548488229,1.10459878370759,0.161646056818812,5.68015348026583,0.604512589365842,0.847802961552438,0.386521706326594,0.272746120590835,0,0.609868530647977,0.265059536642971,0.464775771478074,0.10366105501537,0.504641701751257,1.09493207722749,0,1.28648187638577,0,0.464367928031979,3.60939740834793,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,1.02940686179115,0.329250856225877,0,0,0.185176890317059,0.325808305310325,0,0,0.579652024875384,0,0.866198686566443,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.53735113621709,0,0,0,0,0,0,0,0.190493682876507,1.90994212779139,0,0,0.308482478109971,0,0.571652865261156,0,0.87192013766656,0.1466765716419,2.45616259939778,7.15312891703765,0.845302752556,0.26593811658487,2.08014873822732,0,0,0.532844358032199,1.14382394926518,9.22456729165453,0.823240336780769,0,0.710783897485092,0,2.1100756394171,0.871533458600294,0.399891964728228,0,0,2.10833939483032,1.19812427745791,2.29723871668228,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0.415941723061614,0.178428988797162,0,0.35142424497814,0.300946099727719,0,4.1389228517002,0,0.737476674166813,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,1.81434175997808,3.72161711728165,1.99500565274481,1.12264037773229,1.15325234330131,1.02341449813341,3.05622450172854,1.48418066444991,0.308419387605311,1.59805552781814,0.328508624055237,0.519254429183621,0.116210378459959,0.120859449591622,0.802025881213139,0.0920809889358963,0.459257792658427,0.546273504020151,1.83574180943194,0,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0.0915694648183434,0.41254749960294,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,2.51849877464512,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,2.2875623270859,0.255897791311334,0.42793898803392,0,0,0.719489830333259,0.823611089208164,0.235624804691373,0,0,0,0,0.731140468893853,0,0.409499734223957,0.989838023675989,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,1.57198465620994,1.07001315444375,0.354761064070598,1.47775344708365,2.30506425071931,0,0.699869440489966,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.637705090915289,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0,0,0,1.44701316529778,0,0.211125408127993,2.59022384726391,0,0,0.306806047506464,0,4.0435146396035,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0.569219092059585,0.277349346026277,1.73559738335131,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0.203996435272644,0.866851769704557,0,0,0,0.859530882839914,0,0.558564802544508,0.229160424011684,0,0.199679000498991,1.28767814440971,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0.482259445395058,2.75078873194468,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0.19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| ||
|short_description=p@chr15:89444904..89444930,+ | |short_description=p@chr15:89444904..89444930,+ | ||
}} | }} |
Latest revision as of 05:15, 25 July 2015
Short description: | p@chr15:89444904..89444930, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89444904..89444930, + |
Coexpression cluster: | C568_Mesenchymal_Fibroblast_Adipocyte_Preadipocyte_Chondrocyte_aorta_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.68e-17 | 15 |
preadipocyte | 3.18e-12 | 12 |
fibroblast | 1.61e-10 | 76 |
adipocyte of omentum tissue | 1.58e-09 | 3 |
subcutaneous fat cell | 3.12e-09 | 3 |
fibrocyte | 4.56e-09 | 3 |
tendon cell | 4.56e-09 | 3 |
multi fate stem cell | 1.26e-08 | 427 |
preadipocyte of the breast | 1.88e-08 | 3 |
somatic stem cell | 2.62e-08 | 433 |
connective tissue cell | 2.79e-08 | 361 |
mesenchymal cell | 3.68e-08 | 354 |
omentum preadipocyte | 5.59e-08 | 3 |
stem cell | 6.71e-08 | 441 |
stromal cell | 1.58e-07 | 28 |
mesenchymal stem cell of umbilical cord | 2.20e-07 | 6 |
GAG secreting cell | 3.80e-07 | 9 |
carbohydrate secreting cell | 3.80e-07 | 9 |
motile cell | 6.87e-07 | 386 |
adipocyte of breast | 9.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.90e-16 | 6 |
peritoneum | 8.90e-16 | 6 |
abdominal cavity | 8.90e-16 | 6 |
visceral peritoneum | 8.90e-16 | 6 |
cavity lining | 5.67e-13 | 12 |
serous membrane | 5.67e-13 | 12 |
subcutaneous adipose tissue | 3.12e-09 | 3 |
hypodermis | 4.00e-09 | 5 |
dense regular connective tissue | 4.56e-09 | 3 |
tendon | 4.56e-09 | 3 |
regular connective tissue | 4.56e-09 | 3 |
adipose tissue | 1.14e-08 | 14 |
connective tissue | 2.58e-08 | 371 |
integument | 5.43e-08 | 46 |
integumental system | 5.43e-08 | 46 |
mesenchyme of umbilical cord | 2.20e-07 | 6 |