FFCP PHASE1:Hg19::chr17:34328622..34328633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6359 | |EntrezGene=6359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10613 | |HGNC=10613 | ||
|TSSclassifier=strong | |||
|UniProt=Q16663 | |UniProt=Q16663 | ||
|association_with_transcript=-32bp_to_ENST00000354059,ENST00000481427,ENST00000495214_5end | |association_with_transcript=-32bp_to_ENST00000354059,ENST00000481427,ENST00000495214_5end | ||
|cluster_id=chr17:34328622..34328633,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_4_at_CCL15_5end | |description=CAGE_peak_4_at_CCL15_5end | ||
|id=chr17:34328622..34328633,- | |id=chr17:34328622..34328633,- | ||
|ontology_enrichment_celltype=CL:0000181!2.89e-07!12;CL:0000417!2.89e-07!12;CL:0000668!2.89e-07!12;CL:0000414!2.89e-07!12;CL:0000412!2.89e-07!12;CL:0000182!2.89e-07!12 | |ontology_enrichment_celltype=CL:0000181!2.89e-07!12;CL:0000417!2.89e-07!12;CL:0000668!2.89e-07!12;CL:0000414!2.89e-07!12;CL:0000412!2.89e-07!12;CL:0000182!2.89e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.49e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.07e-08!2 | |ontology_enrichment_disease=DOID:3493!1.07e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.68e-11!129;UBERON:0004185!1.68e-11!129;UBERON:0000160!1.01e-09!27;UBERON:0001007!1.49e-09!155;UBERON:0001555!1.49e-09!155;UBERON:0007026!1.49e-09!155;UBERON:0004119!4.16e-09!169;UBERON:0000925!4.16e-09!169;UBERON:0006595!4.16e-09!169;UBERON:0009854!6.26e-09!23;UBERON:0005409!7.60e-09!35;UBERON:0000059!1.27e-08!11;UBERON:0002107!1.72e-08!19;UBERON:0006925!1.72e-08!19;UBERON:0008836!1.72e-08!19;UBERON:0003127!2.09e-08!2;UBERON:0009497!4.22e-08!25;UBERON:0000015!4.22e-08!25;UBERON:0002423!4.22e-08!25;UBERON:0006235!4.22e-08!25;UBERON:0004161!4.22e-08!25;UBERON:0009856!9.51e-08!26;UBERON:0008835!3.37e-07!22;UBERON:0003894!3.37e-07!22;UBERON:0001155!3.60e-07!9 | |ontology_enrichment_uberon=UBERON:0004921!1.68e-11!129;UBERON:0004185!1.68e-11!129;UBERON:0000160!1.01e-09!27;UBERON:0001007!1.49e-09!155;UBERON:0001555!1.49e-09!155;UBERON:0007026!1.49e-09!155;UBERON:0004119!4.16e-09!169;UBERON:0000925!4.16e-09!169;UBERON:0006595!4.16e-09!169;UBERON:0009854!6.26e-09!23;UBERON:0005409!7.60e-09!35;UBERON:0000059!1.27e-08!11;UBERON:0002107!1.72e-08!19;UBERON:0006925!1.72e-08!19;UBERON:0008836!1.72e-08!19;UBERON:0003127!2.09e-08!2;UBERON:0009497!4.22e-08!25;UBERON:0000015!4.22e-08!25;UBERON:0002423!4.22e-08!25;UBERON:0006235!4.22e-08!25;UBERON:0004161!4.22e-08!25;UBERON:0009856!9.51e-08!26;UBERON:0008835!3.37e-07!22;UBERON:0003894!3.37e-07!22;UBERON:0001155!3.60e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.51e-36;17!UBERON:0002108;1.52e-33;4!UBERON:0005409;3.54e-28;22!UBERON:0001155;1.45e-18;9!UBERON:0004921;4.04e-17;33!UBERON:0000059;2.55e-15;11!UBERON:0006955;2.27e-10;2!UBERON:0004801;2.27e-10;2!UBERON:0002114;2.12e-07;2!UBERON:0001555;3.31e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.88e-36,17;UBERON:0002108,1.60e-33,4;UBERON:0005409,5.75e-25,25;UBERON:0001155,1.25e-18,9;UBERON:0000059,2.25e-15,11;UBERON:0006955,2.49e-10,2;UBERON:0004801,2.49e-10,2;UBERON:0002114,2.19e-07,2;UBERON:0004921,3.92e-07,118 | |||
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| ||
|short_description=p4@CCL15 | |short_description=p4@CCL15 | ||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p4@CCL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCL15_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -32bp_to_ENST00000354059, ENST00000481427, ENST00000495214_5end |
EntrezGene: | CCL15 |
HGNC: | 10613 |
UniProt: | Q16663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.88e-36 | 17 |
small intestine | 1.60e-33 | 4 |
gastrointestinal system | 5.75e-25 | 25 |
colon | 1.25e-18 | 9 |
large intestine | 2.25e-15 | 11 |
uterine epithelium | 2.49e-10 | 2 |
cervix epithelium | 2.49e-10 | 2 |
duodenum | 2.19e-07 | 2 |
subdivision of digestive tract | 3.92e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.07e-10 | 2 |