FFCP PHASE1:Hg19::chrX:152770101..152770112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=P21810 | |UniProt=P21810 | ||
|association_with_transcript=11bp_to_BT007323_5end | |association_with_transcript=11bp_to_BT007323_5end | ||
|cluster_id=chrX:152770101..152770112,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_23_at_BGN_5end | |description=CAGE_peak_23_at_BGN_5end | ||
|id=chrX:152770101..152770112,+ | |id=chrX:152770101..152770112,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.66e-19!180;CL:0000057!1.82e-12!75;CL:0000359!6.08e-10!32;CL:0000183!6.78e-10!59;CL:0000187!8.04e-10!54;CL:0000222!1.01e-09!119;CL:0000680!3.02e-09!57;CL:0000056!3.02e-09!57;CL:0000355!3.02e-09!57;CL:0000393!2.14e-08!60;CL:0000211!2.14e-08!60;CL:0000327!2.58e-08!14;CL:0000192!5.85e-08!42;CL:0000514!5.85e-08!42 | |ontology_enrichment_celltype=CL:0000055!9.66e-19!180;CL:0000057!1.82e-12!75;CL:0000359!6.08e-10!32;CL:0000183!6.78e-10!59;CL:0000187!8.04e-10!54;CL:0000222!1.01e-09!119;CL:0000680!3.02e-09!57;CL:0000056!3.02e-09!57;CL:0000355!3.02e-09!57;CL:0000393!2.14e-08!60;CL:0000211!2.14e-08!60;CL:0000327!2.58e-08!14;CL:0000192!5.85e-08!42;CL:0000514!5.85e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000327;1.20e-15;15!CL:0000499;1.58e-10;28!CL:0000138;5.59e-10;6!CL:0000153;8.18e-09;9!CL:0000447;8.18e-09;9!CL:0002548;9.63e-09;6!CL:0002494;5.50e-07;16!CL:0000708;8.20e-07;3!CL:0000197;9.18e-07;6!CL:0000098;9.18e-07;6!CL:0002167;9.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,7.02e-16,15;CL:0000499,1.07e-10,28;CL:0000058,4.97e-10,6;CL:0000138,4.97e-10,6;CL:0000057,1.29e-09,76;CL:0000153,5.94e-09,9;CL:0000447,5.94e-09,9;CL:0002548,8.00e-09,6;CL:0002494,6.36e-07,16;CL:0000708,8.26e-07,3;CL:0000197,9.05e-07,6;CL:0000098,9.05e-07,6;CL:0002167,9.05e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;7.70e-10;33!UBERON:0004571;7.70e-10;33!UBERON:0007100;1.56e-09;25!UBERON:0000948;2.09e-09;22!UBERON:0001637;2.04e-08;42!UBERON:0003509;2.04e-08;42!UBERON:0004572;2.04e-08;42!UBERON:0003210;8.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.97e-11,83;UBERON:0004573,5.65e-11,33;UBERON:0004571,5.65e-11,33;UBERON:0003914,9.79e-11,117;UBERON:0001637,3.05e-10,42;UBERON:0003509,3.05e-10,42;UBERON:0004572,3.05e-10,42;UBERON:0007100,5.49e-10,27;UBERON:0000948,7.41e-10,24;UBERON:0005498,7.41e-10,24;UBERON:0004140,7.41e-10,24;UBERON:0009881,7.41e-10,24;UBERON:0004141,7.41e-10,24;UBERON:0003084,7.41e-10,24;UBERON:0007005,7.41e-10,24;UBERON:0004139,7.41e-10,24;UBERON:0004291,7.41e-10,24;UBERON:0001009,8.93e-10,112;UBERON:0004535,1.98e-09,109;UBERON:0007500,3.14e-09,59;UBERON:0001981,3.14e-09,59;UBERON:0004537,3.14e-09,59;UBERON:0006965,3.14e-09,59;UBERON:0002049,1.97e-08,78;UBERON:0007798,1.97e-08,78;UBERON:0000055,2.61e-08,68;UBERON:0004797,7.09e-08,7;UBERON:0003210,8.26e-07,3;UBERON:0000947,8.59e-07,21;UBERON:0010191,8.59e-07,21 | |||
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| ||
|short_description=p23@BGN | |short_description=p23@BGN | ||
}} | }} |
Latest revision as of 23:43, 19 September 2015
Short description: | p23@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 11bp_to_BT007323_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 7.02e-16 | 15 |
stromal cell | 1.07e-10 | 28 |
chondroblast | 4.97e-10 | 6 |
chondrocyte | 4.97e-10 | 6 |
fibroblast | 1.29e-09 | 76 |
GAG secreting cell | 5.94e-09 | 9 |
carbohydrate secreting cell | 5.94e-09 | 9 |
cardiac fibroblast | 8.00e-09 | 6 |
cardiocyte | 6.36e-07 | 16 |
leptomeningeal cell | 8.26e-07 | 3 |
receptor cell | 9.05e-07 | 6 |
sensory epithelial cell | 9.05e-07 | 6 |
olfactory epithelial cell | 9.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.97e-11 | 83 |
systemic artery | 5.65e-11 | 33 |
systemic arterial system | 5.65e-11 | 33 |
epithelial tube | 9.79e-11 | 117 |
artery | 3.05e-10 | 42 |
arterial blood vessel | 3.05e-10 | 42 |
arterial system | 3.05e-10 | 42 |
primary circulatory organ | 5.49e-10 | 27 |
heart | 7.41e-10 | 24 |
primitive heart tube | 7.41e-10 | 24 |
primary heart field | 7.41e-10 | 24 |
anterior lateral plate mesoderm | 7.41e-10 | 24 |
heart tube | 7.41e-10 | 24 |
heart primordium | 7.41e-10 | 24 |
cardiac mesoderm | 7.41e-10 | 24 |
cardiogenic plate | 7.41e-10 | 24 |
heart rudiment | 7.41e-10 | 24 |
circulatory system | 8.93e-10 | 112 |
cardiovascular system | 1.98e-09 | 109 |
epithelial tube open at both ends | 3.14e-09 | 59 |
blood vessel | 3.14e-09 | 59 |
blood vasculature | 3.14e-09 | 59 |
vascular cord | 3.14e-09 | 59 |
vasculature | 1.97e-08 | 78 |
vascular system | 1.97e-08 | 78 |
vessel | 2.61e-08 | 68 |
blood vessel layer | 7.09e-08 | 7 |
blood-cerebrospinal fluid barrier | 8.26e-07 | 3 |
aorta | 8.59e-07 | 21 |
aortic system | 8.59e-07 | 21 |