FFCP PHASE1:Hg19::chrY:21729768..21729801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18473 | |HGNC=18473 | ||
|TSSclassifier=strong | |||
|UniProt=B4E0J6 | |UniProt=B4E0J6 | ||
|association_with_transcript=53bp_to_ENST00000447202_5end | |association_with_transcript=53bp_to_ENST00000447202_5end | ||
|cluster_id=chrY:21729768..21729801,+ | |||
|coexpression_cluster_id=C967 | |||
|description=CAGE_peak_3_at_TXLNG2P_5end | |description=CAGE_peak_3_at_TXLNG2P_5end | ||
|id=chrY:21729768..21729801,+ | |id=chrY:21729768..21729801,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.28e-09!53;CL:0000051!3.28e-09!53;CL:0000084!7.22e-09!25;CL:0000827!7.22e-09!25;CL:0000838!1.12e-08!52 | |ontology_enrichment_celltype=CL:0000542!3.28e-09!53;CL:0000051!3.28e-09!53;CL:0000084!7.22e-09!25;CL:0000827!7.22e-09!25;CL:0000838!1.12e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.59e-17;25!CL:0000542;7.42e-14;53!CL:0000791;1.20e-11;18!CL:0000789;1.20e-11;18!CL:0002419;1.20e-11;18!CL:0000624;5.48e-10;6!CL:0000623;3.08e-08;3!CL:0000898;4.96e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.48e-23,53;CL:0000051,9.48e-23,53;CL:0000838,1.86e-21,52;CL:0000084,1.36e-17,25;CL:0000827,1.36e-17,25;CL:0000988,1.75e-15,177;CL:0000037,3.30e-15,168;CL:0000738,3.22e-14,136;CL:0002087,5.05e-13,115;CL:0002032,8.89e-12,161;CL:0000837,8.89e-12,161;CL:0000791,1.20e-11,18;CL:0000789,1.20e-11,18;CL:0002420,1.20e-11,18;CL:0002419,1.20e-11,18;CL:0000790,1.20e-11,18;CL:0000624,5.76e-10,6;CL:0002031,1.93e-09,120;CL:0000623,3.19e-08,3;CL:0000825,3.19e-08,3;CL:0000898,4.97e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;7.42e-14;53!CL:0000790;1.20e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.23e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.13e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TXLNG2P | |short_description=p3@TXLNG2P | ||
}} | }} |
Latest revision as of 17:27, 16 September 2015
Short description: | p3@TXLNG2P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TXLNG2P_5end |
Coexpression cluster: | C967_CD4_CD19_CD8_Natural_Dendritic_lung_Basophils |
Association with transcript: | 53bp_to_ENST00000447202_5end |
EntrezGene: | NA |
HGNC: | 18473 |
UniProt: | B4E0J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.48e-23 | 53 |
common lymphoid progenitor | 9.48e-23 | 53 |
lymphoid lineage restricted progenitor cell | 1.86e-21 | 52 |
T cell | 1.36e-17 | 25 |
pro-T cell | 1.36e-17 | 25 |
hematopoietic cell | 1.75e-15 | 177 |
hematopoietic stem cell | 3.30e-15 | 168 |
leukocyte | 3.22e-14 | 136 |
nongranular leukocyte | 5.05e-13 | 115 |
hematopoietic oligopotent progenitor cell | 8.89e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.89e-12 | 161 |
mature alpha-beta T cell | 1.20e-11 | 18 |
alpha-beta T cell | 1.20e-11 | 18 |
immature T cell | 1.20e-11 | 18 |
mature T cell | 1.20e-11 | 18 |
immature alpha-beta T cell | 1.20e-11 | 18 |
CD4-positive, alpha-beta T cell | 5.76e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 1.93e-09 | 120 |
natural killer cell | 3.19e-08 | 3 |
pro-NK cell | 3.19e-08 | 3 |
naive T cell | 4.97e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.13e-07 | 10 |